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Molecules (Basel, Switzerland)
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October 13, 2021
Comparing Dimerization Free Energies and Binding Modes of Small Aromatic Molecules with Different Force Fields
Ilias Patmanidis, Riccardo Alessandri, Alex H de Vries, et al.
The Journal of Physical Chemistry. B
|
September 17, 2009
A coarse-grained model for polyethylene oxide and polyethylene glycol: conformation and hydrodynamics
Hwankyu Lee, Alex H de Vries, Siewert-Jan Marrink, et al.
Physical Chemistry Chemical Physics : PCCP
|
February 19, 2010
Comment on "On using a too large integration time step in molecular dynamics simulations of coarse-grained molecular models" by M. Winger, D. Trzesniak, R. Baron and W. F. van Gunsteren, Phys. Chem. Chem. Phys., 2009, 11, 1934
Siewert J Marrink, Xavier Periole, D Peter Tieleman, et al.
Biophysical Chemistry
|
July 15, 2019
Binding of quinazolinones to c-KIT G-quadruplex; an interplay between hydrogen bonding and π-π stacking
Kiana Gholamjani Moghaddam, Alex H de Vries, Siewert J Marrink, et al.
Proceedings of the National Academy of Sciences of the United States of America
|
April 6, 2005
Molecular structure of the lecithin ripple phase
Alex H de Vries, Serge Yefimov, Alan E Mark, et al.
The Journal of Physical Chemistry. B
|
July 21, 2006
Molecular dynamics simulations of phospholipid bilayers: Influence of artificial periodicity, system size, and simulation time
Alex H de Vries, Indira Chandrasekhar, Wilfred F van Gunsteren, et al.
Journal of Chemical Theory and Computation
|
June 23, 2020
Coupling Coarse-Grained to Fine-Grained Models via Hamiltonian Replica Exchange
Yang Liu, Weria Pezeshkian, Jonathan Barnoud, et al.
Faraday Discussions
|
May 23, 2025
Fiber formation seen through the high-resolution computational microscope
Tomasz K Piskorz, Vasudevan Lakshminarayanan, Alex H de Vries, et al.
The Journal of Physical Chemistry. B
|
August 4, 2006
Configurational entropies of lipids in pure and mixed bilayers from atomic-level and coarse-grained molecular dynamics simulations
Riccardo Baron, Alex H de Vries, Philippe H Hünenberger, et al.
The Journal of Physical Chemistry. B
|
July 3, 2018
Transferable MARTINI Model of Poly(ethylene Oxide)
Fabian Grunewald, Giulia Rossi, Alex H de Vries, et al.
Page
of 6
Search research articles
Search
Showing results (11-20 of 56) with videos related to
Sort By:
Page
of 6
Molecules (Basel, Switzerland)
|
October 13, 2021
Comparing Dimerization Free Energies and Binding Modes of Small Aromatic Molecules with Different Force Fields
Ilias Patmanidis, Riccardo Alessandri, Alex H de Vries, et al.
The Journal of Physical Chemistry. B
|
September 17, 2009
A coarse-grained model for polyethylene oxide and polyethylene glycol: conformation and hydrodynamics
Hwankyu Lee, Alex H de Vries, Siewert-Jan Marrink, et al.
Physical Chemistry Chemical Physics : PCCP
|
February 19, 2010
Comment on "On using a too large integration time step in molecular dynamics simulations of coarse-grained molecular models" by M. Winger, D. Trzesniak, R. Baron and W. F. van Gunsteren, Phys. Chem. Chem. Phys., 2009, 11, 1934
Siewert J Marrink, Xavier Periole, D Peter Tieleman, et al.
Biophysical Chemistry
|
July 15, 2019
Binding of quinazolinones to c-KIT G-quadruplex; an interplay between hydrogen bonding and π-π stacking
Kiana Gholamjani Moghaddam, Alex H de Vries, Siewert J Marrink, et al.
Proceedings of the National Academy of Sciences of the United States of America
|
April 6, 2005
Molecular structure of the lecithin ripple phase
Alex H de Vries, Serge Yefimov, Alan E Mark, et al.
The Journal of Physical Chemistry. B
|
July 21, 2006
Molecular dynamics simulations of phospholipid bilayers: Influence of artificial periodicity, system size, and simulation time
Alex H de Vries, Indira Chandrasekhar, Wilfred F van Gunsteren, et al.
Journal of Chemical Theory and Computation
|
June 23, 2020
Coupling Coarse-Grained to Fine-Grained Models via Hamiltonian Replica Exchange
Yang Liu, Weria Pezeshkian, Jonathan Barnoud, et al.
Faraday Discussions
|
May 23, 2025
Fiber formation seen through the high-resolution computational microscope
Tomasz K Piskorz, Vasudevan Lakshminarayanan, Alex H de Vries, et al.
The Journal of Physical Chemistry. B
|
August 4, 2006
Configurational entropies of lipids in pure and mixed bilayers from atomic-level and coarse-grained molecular dynamics simulations
Riccardo Baron, Alex H de Vries, Philippe H Hünenberger, et al.
The Journal of Physical Chemistry. B
|
July 3, 2018
Transferable MARTINI Model of Poly(ethylene Oxide)
Fabian Grunewald, Giulia Rossi, Alex H de Vries, et al.
Page
of 6