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Systematic Biology|October 15, 2008
Wagner and Dollo: a stochastic duet by composing two parsimonious solosAlexander V Alekseyenko, Christopher J Lee, Marc A SuchardBioinformatics (Oxford, England)|January 20, 2007
Nested Containment List (NCList): a new algorithm for accelerating interval query of genome alignment and interval databasesAlexander V Alekseyenko, Christopher J LeeMolecular Biology and Evolution|March 10, 2012
Improving the accuracy of demographic and molecular clock model comparison while accommodating phylogenetic uncertaintyGuy Baele, Philippe Lemey, Trevor Bedford, et al.RNA (New York, N.Y.)|March 21, 2007
Global analysis of exon creation versus loss and the role of alternative splicing in 17 vertebrate genomesAlexander V Alekseyenko, Namshin Kim, Christopher J LeeMolecular Biology and Evolution|November 30, 2010
Testing spatiotemporal hypothesis of bacterial evolution using methicillin-resistant Staphylococcus aureus ST239 genome-wide data within a bayesian frameworkRebecca R Gray, Andrew J Tatem, Judith A Johnson, et al.Bioinformatics (Oxford, England)|August 13, 2016
Multivariate Welch t-test on distancesAlexander V AlekseyenkoBMC Bioinformatics|May 29, 2021
A phylogenetic approach for weighting genetic sequencesNicola De Maio, Alexander V Alekseyenko, William J Coleman-Smith, et al.Science (New York, N.Y.)|August 28, 2012
Mapping the origins and expansion of the Indo-European language familyRemco Bouckaert, Philippe Lemey, Michael Dunn, et al.Plos One|November 15, 2017
Phylogenic inference using alignment-free methods for applications in microbial community surveys using 16s rRNA geneYifei Zhang, Alexander V AlekseyenkoGenetics|March 23, 2005
Stochastic models for horizontal gene transfer: taking a random walk through tree spaceMarc A SuchardPageof 55