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BMC Systems Biology|December 21, 2010
Features analysis for identification of date and party hubs in protein interaction network of Saccharomyces CerevisiaeMitra Mirzarezaee, Babak N Araabi, Mehdi SadeghiJournal of Theoretical Biology|April 17, 2012
Transcription factor binding sites detection by using alignment-based approachGhasem Mahdevar, Mehdi Sadeghi, Abbas Nowzari-DaliniStatistical Applications in Genetics and Molecular Biology|September 2, 2017
Bayesian comparison of protein structures using partial Procrustes distanceNasim Ejlali, Mohammad Reza Faghihi, Mehdi SadeghiNucleic Acids Research|March 30, 2026
Boolean logic links chromatin accessibility states to gene expression variability across cell typesSeyed Amir Malekpour, Mohieddin Jafari, Mehdi SadeghiMathematical Biosciences|July 19, 2016
MGP-HMM: Detecting genome-wide CNVs using an HMM for modeling mate pair insertion sizes and read countsSeyed Amir Malekpour, Hamid Pezeshk, Mehdi SadeghiPlos One|July 31, 2020
A computational model of stem cell molecular mechanism to maintain tissue homeostasisNajme Khorasani, Mehdi Sadeghi, Abbas Nowzari-DaliniPlos One|July 26, 2024
Comprehensive integrated single-cell RNA sequencing analysis of brain metastasis and glioma microenvironment: Contrasting heterogeneity landscapesSeyedeh Fatemeh Sajjadi, Najmeh Salehi, Mehdi SadeghiScientific Reports|March 7, 2018
MSeq-CNV: accurate detection of Copy Number Variation from Sequencing of Multiple samplesSeyed Amir Malekpour, Hamid Pezeshk, Mehdi SadeghiBMC Bioinformatics|November 5, 2016
PSE-HMM: genome-wide CNV detection from NGS data using an HMM with Position-Specific Emission probabilitiesSeyed Amir Malekpour, Hamid Pezeshk, Mehdi SadeghiJournal of Microbiology (Seoul, Korea)|December 29, 2011
Dynamical analysis of yeast protein interaction network during the sake brewing processMitra Mirzarezaee, Mehdi Sadeghi, Babak N AraabiPageof 46