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Nucleic Acids Research|May 17, 2023
WebQUAST: online evaluation of genome assembliesAlla Mikheenko, Vladislav Saveliev, Pascal Hirsch, et al.Bioinformatics (Oxford, England)|November 29, 2015
MetaQUAST: evaluation of metagenome assembliesAlla Mikheenko, Vladislav Saveliev, Alexey GurevichBioinformatics (Oxford, England)|July 6, 2016
Icarus: visualizer for de novo assembly evaluationAlla Mikheenko, Gleb Valin, Andrey Prjibelski, et al.Bioinformatics (Oxford, England)|June 29, 2018
Versatile genome assembly evaluation with QUAST-LGAlla Mikheenko, Andrey Prjibelski, Vladislav Saveliev, et al.Metabolites|August 25, 2022
NPvis: An Interactive Visualizer of Peptidic Natural Product-MS/MS MatchesOlga Kunyavskaya, Alla Mikheenko, Alexey GurevichBioinformatics (Oxford, England)|February 21, 2013
QUAST: quality assessment tool for genome assembliesAlexey Gurevich, Vladislav Saveliev, Nikolay Vyahhi, et al.Nature Microbiology|January 24, 2018
Increased diversity of peptidic natural products revealed by modification-tolerant database search of mass spectraAlexey Gurevich, Alla Mikheenko, Alexander Shlemov, et al.Bioinformatics (Oxford, England)|July 14, 2020
TandemTools: mapping long reads and assessing/improving assembly quality in extra-long tandem repeatsAlla Mikheenko, Andrey V Bzikadze, Alexey Gurevich, et al.Bioinformatics (Oxford, England)|February 5, 2019
Assembly Graph Browser: interactive visualization of assembly graphsAlla Mikheenko, Mikhail KolmogorovNature Chemical Biology|November 8, 2016
Dereplication of peptidic natural products through database search of mass spectraHosein Mohimani, Alexey Gurevich, Alla Mikheenko, et al.Pageof 10