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Bioinformatics (Oxford, England)|April 8, 2024
Improving the performance of supervised deep learning for regulatory genomics using phylogenetic augmentationAndrew G Duncan, Jennifer A Mitchell, Alan M MosesGenome Research|March 13, 2021
A flexible repertoire of transcription factor binding sites and a diversity threshold determines enhancer activity in embryonic stem cellsGurdeep Singh, Shanelle Mullany, Sakthi D Moorthy, et al.Bioinformatics (Oxford, England)|February 13, 2019
Variational infinite heterogeneous mixture model for semi-supervised clustering of heart enhancersTahmid F Mehdi, Gurdeep Singh, Jennifer A Mitchell, et al.BMC Evolutionary Biology|December 10, 2009
Statistical tests for natural selection on regulatory regions based on the strength of transcription factor binding sitesAlan M MosesBMC Bioinformatics|July 26, 2011
Ranking insertion, deletion and nonsense mutations based on their effect on genetic informationAmin Zia, Alan M MosesBMC Systems Biology|February 8, 2011
Modeling the evolution of a classic genetic switchChristos Josephides, Alan M MosesMolecular Biology and Evolution|December 20, 2008
Inferring selection on amino acid preference in protein domainsAlan M Moses, Richard DurbinBMC Bioinformatics|June 29, 2012
Towards a theoretical understanding of false positives in DNA motif findingAmin Zia, Alan M MosesYeast (Chichester, England)|April 25, 2014
Insights into molecular evolution from yeast genomicsTaraneh Zarin, Alan M MosesTrends in Genetics : TIG|September 7, 2010
Moving from transcriptional to phospho-evolution: generalizing regulatory evolution?Alan M Moses, Christian R LandryPageof 14