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Biorxiv : the Preprint Server for Biology|May 27, 2024
Supervised fine-tuning of pre-trained antibody language models improves antigen specificity predictionMeng Wang, Jonathan Patsenker, Henry Li, et al.Immunoinformatics (Amsterdam, Netherlands)|July 9, 2026
AMULETY: A Python package to embed adaptive immune receptor sequencesMeng Wang, Wengyao Jiang, Yuval Kluger, et al.Nucleic Acids Research|July 21, 2016
RAG1 targeting in the genome is dominated by chromatin interactions mediated by the non-core regions of RAG1 and RAG2Yaakov Maman, Grace Teng, Rashu Seth, et al.Biorxiv : the Preprint Server for Biology|October 24, 2023
Inferring B cell phylogenies from paired heavy and light chain BCR sequences with DowserCole G Jensen, Jacob A Sumner, Steven H Kleinstein, et al.BMC Bioinformatics|July 20, 2023
A pipeline for the retrieval and extraction of domain-specific information with application to COVID-19 immune signaturesAdam J H Newton, David Chartash, Steven H Kleinstein, et al.Journal of Immunology (Baltimore, Md. : 1950)|February 16, 2020
Seasonal Variability and Shared Molecular Signatures of Inactivated Influenza Vaccination in Young and Older AdultsStefan Avey, Subhasis Mohanty, Daniel G Chawla, et al.Plos Computational Biology|April 3, 2019
Gene set meta-analysis with Quantitative Set Analysis for Gene Expression (QuSAGE)Hailong Meng, Gur Yaari, Christopher R Bolen, et al.International Journal of Data Mining and Bioinformatics|August 3, 2011
Activated germinal centre B cells undergo directed migrationMark J O'Connor, Anja E Hauser, Ann M Haberman, et al.Proceedings. IEEE International Conference on Bioinformatics and Biomedicine|October 28, 2021
A linked data graph approach to integration of immunological dataSyed Ahmad Chan Bukhari, Jeff Mandell, Steven H Kleinstein, et al.Journal of Immunology (Baltimore, Md. : 1950)|April 1, 2024
Inferring B Cell Phylogenies from Paired H and L Chain BCR Sequences with DowserCole G Jensen, Jacob A Sumner, Steven H Kleinstein, et al.Pageof 24