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Plos Computational Biology|November 18, 2024
Integrative pan-cancer analysis reveals a common architecture of dysregulated transcriptional networks characterized by loss of enhancer methylationJørgen Ankill, Zhi Zhao, Xavier Tekpli, et al.
Scientific Reports|May 21, 2016
Coevolution analysis of Hepatitis C virus genome to identify the structural and functional dependency network of viral proteinsRaphaël Champeimont, Elodie Laine, Shuang-Wei Hu, et al.
Plos Computational Biology|January 28, 2022
From complete cross-docking to partners identification and binding sites predictionsChloé Dequeker, Yasser Mohseni Behbahani, Laurent David, et al.
Proteomics|July 5, 2023
LEVELNET to visualize, explore, and compare protein-protein interaction networksYasser Mohseni Behbahani, Paul Saighi, Flavia Corsi, et al.
Bioinformatics Advances|July 8, 2025
Perspective on recent developments and challenges in regulatory and systems genomicsJulia Zeitlinger, Sushmita Roy, Ferhat Ay, et al.
Frontiers in Plant Science|March 21, 2025
Functional recoding of Chlamydomonas reinhardtii thioredoxin type-h into photosynthetic type-f by switching selectivity determinantsStéphane D Lemaire, Gianluca Lombardi, Andrea Mancini, et al.
Genome Biology|April 24, 2015
Cis-regulatory somatic mutations and gene-expression alteration in B-cell lymphomasAnthony Mathelier, Calvin Lefebvre, Allen W Zhang, et al.
Epigenetics & Chromatin|April 20, 2022
Pioneer transcription factors are associated with the modulation of DNA methylation patterns across cancersRoza Berhanu Lemma, Thomas Fleischer, Emily Martinsen, et al.
Plos Computational Biology|January 24, 2009
Joint evolutionary trees: a large-scale method to predict protein interfaces based on sequence samplingStefan Engelen, Ladislas A Trojan, Sophie Sacquin-Mora, et al.
Nucleic Acids Research|September 1, 2024
Identification of transcription factor co-binding patterns with non-negative matrix factorizationIeva Rauluseviciute, Timothée Launay, Guido Barzaghi, et al.
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