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Nucleic Acids Research|January 3, 2018
Bacterial artificial chromosomes establish replication timing and sub-nuclear compartment de novo as extra-chromosomal vectorsJiao Sima, Daniel A Bartlett, Molly R Gordon, et al.
Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology|June 11, 2015
Many paths lead chromatin to the nuclear peripheryMolly R Gordon, Benjamin D Pope, Jiao Sima, et al.
EURASIP Journal on Bioinformatics & Systems Biology|November 21, 2015
Computing interaction probabilities in signaling networksHaitham Gabr, Juan Carlos Rivera-Mulia, David M Gilbert, et al.
Cold Spring Harbor Symposia on Quantitative Biology|November 22, 2015
Large-Scale Chromatin Structure-Function Relationships during the Cell Cycle and Development: Insights from Replication TimingVishnu Dileep, Juan Carlos Rivera-Mulia, Jiao Sima, et al.
Cell Cycle (Georgetown, Tex.)|July 20, 2016
Spatio-temporal re-organization of replication foci accompanies replication domain consolidation during human pluripotent stem cell lineage specificationKorey A Wilson, Andrew G Elefanty, Edouard G Stanley, et al.
Nature Protocols|June 4, 2011
Genome-scale analysis of replication timing: from bench to bioinformaticsTyrone Ryba, Dana Battaglia, Benjamin D Pope, et al.
Nucleus (Austin, Tex.)|October 11, 2011
Evidence for a mammalian late-G1 phase inhibitor of replication licensing distinct from geminin or Cdk activityTakayo Sasaki, Anatoliy Li, Peter J Gillespie, et al.
Bioinformatics (Oxford, England)|February 12, 2011
FISH Finder: a high-throughput tool for analyzing FISH imagesJames W Shirley, Sereyvathana Ty, Shin-ichiro Takebayashi, et al.
BMC Bioinformatics|December 17, 2008
ReplicationDomain: a visualization tool and comparative database for genome-wide replication timing dataNodin Weddington, Alexander Stuy, Ichiro Hiratani, et al.
Proceedings of the National Academy of Sciences of the United States of America|July 19, 2012
Chromatin-interaction compartment switch at developmentally regulated chromosomal domains reveals an unusual principle of chromatin foldingShin-ichiro Takebayashi, Vishnu Dileep, Tyrone Ryba, et al.
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