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Current Protocols in Bioinformatics|February 21, 2020
Constructing and Analyzing Computational Models of Cell Signaling with BioModelAnalyzerBenjamin A Hall, Jasmin FisherBiophysical Journal|July 23, 2015
Emergent stem cell homeostasis in the C. elegans germline is revealed by hybrid modelingBenjamin A Hall, Nir Piterman, Alex Hajnal, et al.Journal of the Royal Society, Interface|June 27, 2014
Logic programming to predict cell fate patterns and retrodict genotypes in organogenesisBenjamin A Hall, Ethan Jackson, Alex Hajnal, et al.Integrative Biology : Quantitative Biosciences From Nano to Macro|June 2, 2018
A toolbox for discrete modelling of cell signalling dynamicsYasmin Z Paterson, David Shorthouse, Markus W Pleijzier, et al.Nature Communications|October 3, 2022
HOXA9 has the hallmarks of a biological switch with implications in blood cancersLaure Talarmain, Matthew A Clarke, David Shorthouse, et al.Briefings in Functional Genomics|February 2, 2010
The executable pathway to biological networksJasmin Fisher, Nir PitermanScientific Reports|February 4, 2015
Drug target optimization in chronic myeloid leukemia using innovative computational platformRyan Chuang, Benjamin A Hall, David Benque, et al.Nature Reviews. Cancer|April 29, 2020
Executable cancer models: successes and challengesMatthew A Clarke, Jasmin FisherFrontiers in Bioengineering and Biotechnology|January 8, 2015
Toward synthesizing executable models in biologyJasmin Fisher, Nir Piterman, Rastislav BodikPageof 10