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The Journal of Chemical Physics|February 8, 2006
The finite state projection algorithm for the solution of the chemical master equationBrian Munsky, Mustafa KhammashPlos Computational Biology|March 12, 2010
Parameter estimation and model selection in computational biologyGabriele Lillacci, Mustafa KhammashPhysical Review. E, Statistical, Nonlinear, and Soft Matter Physics|October 4, 2012
Simulation of stochastic systems via polynomial chaos expansions and convex optimizationLorenzo Fagiano, Mustafa KhammashFrontiers in Bioengineering and Biotechnology|June 27, 2022
Platforms for Optogenetic Stimulation and Feedback ControlSant Kumar, Mustafa KhammashMethods in Molecular Biology (Clifton, N.J.)|March 5, 2024
Realizing Antithetic Integral Feedback Control in Mammalian CellsTimothy Frei, Mustafa KhammashAdvanced Biology|May 24, 2021
Synthetic Biological Approaches for Optogenetics and Tools for Transcriptional Light-Control in BacteriaArmin Baumschlager, Mustafa KhammashBioinformatics (Oxford, England)|July 4, 2013
The signal within the noise: efficient inference of stochastic gene regulation models using fluorescence histograms and stochastic simulationsGabriele Lillacci, Mustafa KhammashPlos Computational Biology|June 4, 2016
Implementation Considerations, Not Topological Differences, Are the Main Determinants of Noise Suppression Properties in Feedback and Incoherent Feedforward CircuitsGentian Buzi, Mustafa KhammashPlos Computational Biology|October 9, 2020
Likelihood-free nested sampling for parameter inference of biochemical reaction networksJan Mikelson, Mustafa KhammashACS Synthetic Biology|January 19, 2018
Perfect Adaptation and Optimal Equilibrium Productivity in a Simple Microbial Biofuel Metabolic Pathway Using Dynamic Integral ControlCorentin Briat, Mustafa KhammashPageof 39