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Evolution; International Journal of Organic Evolution|June 1, 2017
STATISTICAL TESTS OF HOST-PARASITE COSPECIATIONJohn P Huelsenbeck, Bruce Rannala, Ziheng YangGenes & Genetic Systems|December 13, 2006
Proposed standard nomenclature for the alpha- and beta-globin gene familiesGabriela Aguileta, Joseph P Bielawski, Ziheng YangJournal of Molecular Evolution|October 18, 2003
Widespread adaptive evolution in the human immunodeficiency virus type 1 genomeWa Yang, Joseph P Bielawski, Ziheng YangSystematic Biology|January 25, 2020
The Impact of Cross-Species Gene Flow on Species Tree EstimationXiyun Jiao, Tomáš Flouri, Bruce Rannala, et al.BMC Evolutionary Biology|September 1, 2007
Phylogenomic analysis of natural selection pressure in Streptococcus genomesMaria Anisimova, Joseph Bielawski, Katherine Dunn, et al.Systematic Biology|March 14, 2026
Bayesian test of gene flow between sister lineages using genomic dataZiheng Yang, Xiyun Jiao, Sirui Cheng, et al.Molecular Biology and Evolution|June 27, 2025
Inference of Gene Flow between Species from Genomic Data When the Mode, Direction, and Lineages are MisspecifiedYuttapong Thawornwattana, Tomáš Flouri, James Mallet, et al.Systematic Biology|May 27, 2025
Inference of Cross-Species Gene Flow Using Genomic Data Depends on the Methods: Case Study of Gene Flow in DrosophilaJiayi Ji, Thomas Roberts, Tomáš Flouri, et al.Elife|December 18, 2023
Major patterns in the introgression history of Heliconius butterfliesYuttapong Thawornwattana, Fernando Seixas, Ziheng Yang, et al.Nature Ecology & Evolution|October 7, 2017
A biologist's guide to Bayesian phylogenetic analysisFabrícia F Nascimento, Mario Dos Reis, Ziheng YangPageof 400