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Briefings in Bioinformatics|March 22, 2024
DEMO-EM2: assembling protein complex structures from cryo-EM maps through intertwined chain and domain fittingZiying Zhang, Yaxian Cai, Biao Zhang, et al.Science Advances|November 12, 2020
Persistent epigenetic reprogramming of sweet taste by dietAnoumid Vaziri, Morteza Khabiri, Brendan T Genaw, et al.Mbio|March 15, 2022
Epistasis at the SARS-CoV-2 Receptor-Binding Domain Interface and the Propitiously Boring Implications for Vaccine EscapeNash D Rochman, Guilhem Faure, Yuri I Wolf, et al.Cardiology in the Young|January 19, 2026
Surgical strategy for video-assisted minimally invasive surgery of multiple valvular diseasesJinguo Xu, Chengxin ZhangBiorxiv : the Preprint Server for Biology|December 3, 2025
LsrL modulates Lsr2-induced chromatin structure to tune biosynthetic gene cluster regulation in <i>Streptomyces venezuelae</i>Vivian Ramirez, Lauren Tiller, Marcin Jan Szafran, et al.The Journal of Biological Chemistry|February 27, 2025
Viperin expression leads to downregulation of mitochondrial genes through misincorporation of ddhCTP by mitochondrial RNA polymeraseSrijoni Majhi, Pronay Roy, Minshik Jo, et al.Journal of Chemical Information and Modeling|July 28, 2023
VMD as a Platform for Interactive Small Molecule Preparation and Visualization in Quantum and Classical SimulationsMariano Spivak, John E Stone, João Ribeiro, et al.Journal of Computational Chemistry|September 27, 2007
Accelerating molecular modeling applications with graphics processorsJohn E Stone, James C Phillips, Lydia Freddolino, et al.Iscience|October 17, 2022
A unified approach to sequential and non-sequential structure alignment of proteins, RNAs, and DNAsChengxin Zhang, Anna Marie PyleDatabase : the Journal of Biological Databases and Curation|April 3, 2023
PDC: a highly compact file format to store protein 3D coordinatesChengxin Zhang, Anna Marie PylePageof 26