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Methods in Molecular Biology (Clifton, N.J.)|November 11, 2010
OpenMS and TOPP: open source software for LC-MS data analysisAndreas Bertsch, Clemens Gröpl, Knut Reinert, et al.Journal of Proteome Research|April 30, 2011
MSSimulator: Simulation of mass spectrometry dataChris Bielow, Stephan Aiche, Sandro Andreotti, et al.NAR Genomics and Bioinformatics|April 18, 2025
TetRex: a novel algorithm for index-accelerated search of highly conserved motifsRemy M Schwab, Simon Gene Gottlieb, Knut ReinertBMC Bioinformatics|April 10, 2014
Genome alignment with graph data structures: a comparisonBirte Kehr, Kathrin Trappe, Manuel Holtgrewe, et al.BMC Bioinformatics|January 7, 2022
LaRA 2: parallel and vectorized program for sequence-structure alignment of RNA sequencesJörg Winkler, Gianvito Urgese, Elisa Ficarra, et al.BMC Bioinformatics|January 11, 2008
SeqAn an efficient, generic C++ library for sequence analysisAndreas Döring, David Weese, Tobias Rausch, et al.BMC Bioinformatics|February 20, 2013
Optimal precursor ion selection for LC-MALDI MS/MSAlexandra Zerck, Eckhard Nordhoff, Hans Lehrach, et al.Bioinformatics (Oxford, England)|June 9, 2023
Mistle: bringing spectral library predictions to metaproteomics with an efficient search indexYannek Nowatzky, Philipp Benner, Knut Reinert, et al.Molecular & Cellular Proteomics : MCP|December 20, 2012
Tools for label-free peptide quantificationSven Nahnsen, Chris Bielow, Knut Reinert, et al.Bioinformatics (Oxford, England)|October 19, 2002
Multiple sequence alignment with arbitrary gap costs: computing an optimal solution using polyhedral combinatoricsErnst Althaus, Alberto Caprara, Hans-Peter Lenhof, et al.Pageof 11