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Cell Reports Methods|December 1, 2022
Multiset multicover methods for discriminative marker selectionEuxhen Hasanaj, Amir Alavi, Anupam Gupta, et al.Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|July 28, 2009
A combined expression-interaction model for inferring the temporal activity of transcription factorsYanxin Shi, Michael Klutstein, Itamar Simon, et al.Microbiome|April 4, 2019
Dynamic interaction network inference from longitudinal microbiome dataJose Lugo-Martinez, Daniel Ruiz-Perez, Giri Narasimhan, et al.Nucleic Acids Research|August 5, 2008
A probabilistic generative model for GO enrichment analysisYong Lu, Roni Rosenfeld, Itamar Simon, et al.BMC Systems Biology|October 12, 2017
Reconstructing cancer drug response networks using multitask learningMatthew Ruffalo, Petar Stojanov, Venkata Krishna Pillutla, et al.Bioinformatics (Oxford, England)|July 1, 2008
Protein complex identification by supervised graph local clusteringYanjun Qi, Fernanda Balem, Christos Faloutsos, et al.Bioinformatics (Oxford, England)|June 17, 2016
Reconstructing the temporal progression of HIV-1 immune response pathwaysSiddhartha Jain, Joel Arrais, Narasimhan J Venkatachari, et al.Bioinformatics (Oxford, England)|July 21, 2004
Deconvolving cell cycle expression data with complementary informationZiv Bar-Joseph, Shlomit Farkash, David K Gifford, et al.Molecular Systems Biology|January 17, 2007
Reconstructing dynamic regulatory mapsJason Ernst, Oded Vainas, Christopher T Harbison, et al.Cell Reports Methods|October 16, 2025
Using spatial proteomics to enhance cell type assignments in histology imagesMonica T Dayao, Aaron T Mayer, Alexandro E Trevino, et al.Pageof 386