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Briefings in Bioinformatics|June 30, 2011
Comparative genomics approach to detecting split-coding regions in a low-coverage genome: lessons from the chimaera Callorhinchus milii (Holocephali, Chondrichthyes)Christophe Dessimoz, Stefan Zoller, Tereza Manousaki, et al.Nature Structural & Molecular Biology|October 10, 2025
Structural phylogenetics unravels the evolutionary diversification of communication systems in gram-positive bacteria and their virusesDavid Moi, Charles Bernard, Martin Steinegger, et al.Nucleic Acids Research|May 2, 2009
The Microbe browser for comparative genomicsAlexandre Gattiker, Christophe Dessimoz, Adrian Schneider, et al.Journal of Molecular Evolution|September 26, 2025
OrthoXML-Tools: A Toolkit for Manipulating OrthoXML Files for Orthology DataAli Yazdizadeh Kharrazi, Adrian M Altenhoff, Nikolai Romashchenko, et al.Bioinformatics (Oxford, England)|February 15, 2012
Toward community standards in the quest for orthologsChristophe Dessimoz, Toni Gabaldón, David S Roos, et al.Plos Computational Biology|January 24, 2013
Approximate Bayesian computationMikael Sunnåker, Alberto Giovanni Busetto, Elina Numminen, et al.F1000Research|August 6, 2020
A hands-on introduction to querying evolutionary relationships across multiple data sources using SPARQLAna Claudia Sima, Christophe Dessimoz, Kurt Stockinger, et al.Bioinformatics (Oxford, England)|September 9, 2017
Orthologous Matrix (OMA) algorithm 2.0: more robust to asymmetric evolutionary rates and more scalable hierarchical orthologous group inferenceClément-Marie Train, Natasha M Glover, Gaston H Gonnet, et al.F1000Research|March 4, 2024
DrosOMA: the Drosophila Orthologous Matrix browserAntonin Thiébaut, Adrian M Altenhoff, Giulia Campli, et al.F1000Research|June 21, 2022
How to build phylogenetic species trees with OMADavid Dylus, Yannis Nevers, Adrian M Altenhoff, et al.Pageof 19