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Nature Computational Science|November 11, 2024
MassiveFold: unveiling AlphaFold's hidden potential with optimized and parallelized massive samplingNessim Raouraoua, Claudio Mirabello, Thibaut Véry, et al.Proteins|August 7, 2023
Improved multimer prediction using massive sampling with AlphaFold in CASP15Björn WallnerActa Crystallographica. Section D, Structural Biology|March 6, 2020
Estimating local protein model quality: prospects for molecular replacementBjörn WallnerBioinformatics (Oxford, England)|April 10, 2014
ProQM-resample: improved model quality assessment for membrane proteins by limited conformational samplingBjörn WallnerBioinformatics (Oxford, England)|September 15, 2023
AFsample: improving multimer prediction with AlphaFold using massive samplingBjörn WallnerBioinformatics (Oxford, England)|June 18, 2013
Porter, PaleAle 4.0: high-accuracy prediction of protein secondary structure and relative solvent accessibilityClaudio Mirabello, Gianluca PollastriBiomolecules|June 28, 2014
Reconstructing protein structures by neural network pairwise interaction fields and iterative decoy set constructionClaudio Mirabello, Alessandro Adelfio, Gianluca PollastriBioinformatics (Oxford, England)|January 7, 2016
ProQ2: estimation of model accuracy implemented in RosettaKarolis Uziela, Björn WallnerCommunications Biology|March 5, 2025
AFsample2 predicts multiple conformations and ensembles with AlphaFold2Yogesh Kalakoti, Björn WallnerProtein Science : a Publication of the Protein Society|April 30, 2003
Can correct protein models be identified?Björn Wallner, Arne ElofssonPageof 8