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Research Square|July 3, 2026
Spatial Immune Model of Alveolar Lung Infection (SIMALI) Identifies Structural Determinants of Lung InflammationHumayra Tasnim, Stephanie Forrest, Steven Hofmeyr, et al.Nature Communications|May 25, 2021
Identifying molecules as biosignatures with assembly theory and mass spectrometryStuart M Marshall, Cole Mathis, Emma Carrick, et al.Plos Computational Biology|December 23, 2021
Spatially distributed infection increases viral load in a computational model of SARS-CoV-2 lung infectionMelanie E Moses, Steven Hofmeyr, Judy L Cannon, et al.Proceedings of the National Academy of Sciences of the United States of America|March 8, 2019
Environmental control programs the emergence of distinct functional ensembles from unconstrained chemical reactionsAndrew J Surman, Marc Rodriguez-Garcia, Yousef M Abul-Haija, et al.ACS Central Science|May 27, 2024
Investigating and Quantifying Molecular Complexity Using Assembly Theory and SpectroscopyMichael Jirasek, Abhishek Sharma, Jessica R Bame, et al.Journal of Virology|November 12, 2010
Higher level of replication efficiency of 2009 (H1N1) pandemic influenza virus than those of seasonal and avian strains: kinetics from epithelial cell culture and computational modelingHugh Mitchell, Drew Levin, Stephanie Forrest, et al.Artificial Life|April 10, 2020
The Surprising Creativity of Digital Evolution: A Collection of Anecdotes from the Evolutionary Computation and Artificial Life Research CommunitiesJoel Lehman, Jeff Clune, Dusan Misevic, et al.Mathematical Biosciences|June 3, 2023
Challenges in cybersecurity: Lessons from biological defense systemsEdward Schrom, Ann Kinzig, Stephanie Forrest, et al.Developmental and Comparative Immunology|November 22, 2019
Transcription factor NF-κB in a basal metazoan, the sponge, has conserved and unique sequences, activities, and regulationLeah M Williams, Melissa M Inge, Katelyn M Mansfield, et al.Pageof 5