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Genome Announcements|May 25, 2013
Genome Sequence of Xanthomonas arboricola pv. Corylina, Isolated from Turkish Filbert in ColoradoJorge Ibarra Caballero, Marcelo M Zerillo, Jacob Snelling, et al.Algorithms in Bioinformatics : ... International Workshop, WABI ..., Proceedings. WABI (Workshop)|November 3, 2025
Acceleration of FM-index Queries Through Prefix-free ParsingAaron Hong, Marco Oliva, Dominik Köppl, et al.Research Square|November 14, 2023
PFP-FM: An Accelerated FM-indexAaron Hong, Marco Oliva, Dominik Köppl, et al.Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|March 18, 2020
Efficient Construction of a Complete Index for Pan-Genomics Read AlignmentAlan Kuhnle, Taher Mun, Christina Boucher, et al.Algorithms for Molecular Biology : AMB|June 1, 2019
Prefix-free parsing for building big BWTsChristina Boucher, Travis Gagie, Alan Kuhnle, et al.Bioinformatics (Oxford, England)|April 12, 2020
Portable nanopore analytics: are we there yet?Marco Oliva, Franco Milicchio, Kaden King, et al.Plos One|August 26, 2016
aPPRove: An HMM-Based Method for Accurate Prediction of RNA-Pentatricopeptide Repeat Protein Binding EventsThomas Harrison, Jaime Ruiz, Daniel B Sloan, et al.Proceedings. Data Compression Conference|May 30, 2024
CSTs for Terabyte-Sized DataMarco Oliva, Davide Cenzato, Massimiliano Rossi, et al.Bioinformatics (Oxford, England)|September 11, 2019
Fast and accurate correction of optical mapping data via spaced seedsLeena Salmela, Kingshuk Mukherjee, Simon J Puglisi, et al.Bioinformatics (Oxford, England)|February 13, 2020
Metagenome SNP calling via read-colored de Bruijn graphsBahar Alipanahi, Martin D Muggli, Musa Jundi, et al.Pageof 12