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Methods (San Diego, Calif.)|February 22, 2020
Atomistic and coarse-grained simulations of membrane proteins: A practical guideDamien Jefferies, Syma KhalidJournal of Molecular Biology|January 14, 2020
To infect or not to infect: molecular determinants of bacterial outer membrane vesicle internalization by host membranesDamien Jefferies, Syma KhalidThe Journal of Physical Chemistry. B|April 12, 2019
Role of O-Antigen in Response to Mechanical Stress of the E. coli Outer Membrane: Insights from Coarse-Grained MD SimulationsDamien Jefferies, Jonathan Shearer, Syma KhalidJournal of Chemical Theory and Computation|March 9, 2019
Outer Membrane Proteins OmpA, FhuA, OmpF, EstA, BtuB, and OmpX Have Unique Lipopolysaccharide FingerprintsJonathan Shearer, Damien Jefferies, Syma KhalidBiochemistry|March 2, 2017
Through the Lipopolysaccharide Glass: A Potent Antimicrobial Peptide Induces Phase Changes in MembranesDamien Jefferies, Pin-Chia Hsu, Syma KhalidThe Journal of Physical Chemistry. B|October 8, 2016
Molecular Dynamics Simulations Predict the Pathways via Which Pristine Fullerenes Penetrate Bacterial MembranesPin-Chia Hsu, Damien Jefferies, Syma KhalidNature Communications|April 19, 2016
Structural basis for Mep2 ammonium transceptor activation by phosphorylationBert van den Berg, Anupama Chembath, Damien Jefferies, et al.Plos Computational Biology|April 18, 2015
Interaction of the antimicrobial peptide polymyxin B1 with both membranes of E. coli: a molecular dynamics studyNils A Berglund, Thomas J Piggot, Damien Jefferies, et al.Annual Review of Physical Chemistry|February 20, 2020
Molecular Simulations of Gram-Negative Bacterial Membranes Come of AgeWonpil Im, Syma KhalidScientific Reports|January 31, 2018
Communication between the leaflets of asymmetric membranes revealed from coarse-grain molecular dynamics simulationsJonathan Shearer, Syma KhalidPageof 14