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Journal of Proteome Research|March 27, 2015
Kojak: efficient analysis of chemically cross-linked protein complexesMichael R Hoopmann, Alex Zelter, Richard S Johnson, et al.
Biology Open|June 16, 2018
Novel phosphorylation states of the yeast spindle pole bodyKimberly K Fong, Alex Zelter, Beth Graczyk, et al.
Molecular Biology of the Cell|March 24, 2017
Direct measurement of the strength of microtubule attachment to yeast centrosomesKimberly K Fong, Krishna K Sarangapani, Erik C Yusko, et al.
The ISME Journal|September 8, 2019
Metaproteomics reveal that rapid perturbations in organic matter prioritize functional restructuring over taxonomy in western Arctic Ocean microbiomesMolly P Mikan, H Rodger Harvey, Emma Timmins-Schiffman, et al.
Analytical Chemistry|May 2, 2024
A Workflow for Improved Analysis of Cross-Linking Mass Spectrometry Data Integrating Parallel Accumulation-Serial Fragmentation with MeroX and SkylineJuan Camilo Rojas Echeverri, Frank Hause, Claudio Iacobucci, et al.
Elife|February 14, 2017
The Ndc80 complex bridges two Dam1 complex ringsJae Ook Kim, Alex Zelter, Neil T Umbreit, et al.
Nature Methods|July 2, 2025
A transformer model for de novo sequencing of data-independent acquisition mass spectrometry dataJustin Sanders, Bo Wen, Paul A Rudnick, et al.
Nature Communications|April 28, 2025
Harmful algal blooms are preceded by a predictable and quantifiable shift in the oceanic microbiomeMiranda C Mudge, Michael Riffle, Gabriella Chebli, et al.
Biorxiv : the Preprint Server for Biology|October 28, 2024
Carafe enables high quality <i>in silico</i> spectral library generation for data-independent acquisition proteomicsBo Wen, Chris Hsu, Wen-Feng Zeng, et al.
Biorxiv : the Preprint Server for Biology|November 28, 2024
Force transmission through the inner kinetochore is enhanced by centromeric DNA sequencesElise Miedlar, Grace E Hamilton, Samuel R Witus, et al.
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