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Biophysical Journal|April 30, 2003
Single-strand stacking free energy from DNA beacon kineticsDaniel P Aalberts, John M Parman, Noel L GoddardEntropy (Basel, Switzerland)|September 18, 2015
Loop Entropy Assists Tertiary Order: Loopy Stabilization of Stacking MotifsDaniel P AalbertsRNA (New York, N.Y.)|May 28, 2010
A two-length-scale polymer theory for RNA loop free energies and helix stackingDaniel P Aalberts, Nagarajan NandagopalBiophysical Journal|February 28, 2013
Free energy cost of stretching mRNA hairpin loops inhibits small RNA bindingYuzhong Meng, Daniel P AalbertsPhysical Review. E, Statistical, Nonlinear, and Soft Matter Physics|June 1, 2004
Thermodynamic modeling of donor splice site recognition in pre-mRNAJeffrey A Garland, Daniel P AalbertsRNA (New York, N.Y.)|February 15, 2013
Visualizing RNA base-pairing probabilities with RNAbow diagramsDaniel P Aalberts, William K JannenNucleic Acids Research|December 21, 2004
Efficient computation of optimal oligo-RNA bindingNathan O Hodas, Daniel P AalbertsNucleic Acids Research|April 16, 2005
Asymmetry in RNA pseudoknots: observation and theoryDaniel P Aalberts, Nathan O HodasG3 (Bethesda, Md.)|October 11, 2012
Competition between conjugation and M13 phage infection in Escherichia coli in the absence of selection pressure: a kinetic studyZhenmao Wan, Noel L GoddardCell Systems|January 27, 2017
Codon Clarity or Conundrum?Daniel P Aalberts, Gregory Boël, John F HuntPageof 3