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Nature Methods|April 11, 2017
MSFragger: ultrafast and comprehensive peptide identification in mass spectrometry-based proteomicsAndy T Kong, Felipe V Leprevost, Dmitry M Avtonomov, et al.
Current Protocols in Bioinformatics|September 6, 2012
Analyzing protein-protein interactions from affinity purification-mass spectrometry data with SAINTHyungwon Choi, Guomin Liu, Dattatreya Mellacheruvu, et al.
Genetics|February 16, 2013
Genetic networks inducing invasive growth in Saccharomyces cerevisiae identified through systematic genome-wide overexpressionChristian A Shively, Matthew J Eckwahl, Craig J Dobry, et al.
Plos Genetics|March 8, 2014
The yeast Sks1p kinase signaling network regulates pseudohyphal growth and glucose responseCole Johnson, Hye Kyong Kweon, Daniel Sheidy, et al.
Oncotarget|May 19, 2018
PAF1 complex interactions with SETDB1 mediate promoter H3K9 methylation and transcriptional repression of Hoxa9 and Meis1 in acute myeloid leukemiaJames Ropa, Nirmalya Saha, Zhiling Chen, et al.
Nature Methods|December 7, 2010
SAINT: probabilistic scoring of affinity purification-mass spectrometry dataHyungwon Choi, Brett Larsen, Zhen-Yuan Lin, et al.
Molecular & Cellular Proteomics : MCP|June 17, 2020
Kir2.1 Interactome Mapping Uncovers PKP4 as a Modulator of the Kir2.1-Regulated Inward Rectifier Potassium CurrentsSung-Soo Park, Daniela Ponce-Balbuena, Rork Kuick, et al.
British Journal of Haematology|April 1, 2015
Proteomic profiling of naïve multiple myeloma patient plasma cells identifies pathways associated with favourable response to bortezomib-based treatment regimensDominik Dytfeld, Shaun Rosebeck, Malathi Kandarpa, et al.
JCI Insight|June 8, 2018
HSC70 is a chaperone for wild-type and mutant cardiac myosin binding protein CAmelia A Glazier, Neha Hafeez, Dattatreya Mellacheruvu, et al.
Molecular & Cellular Proteomics : MCP|June 14, 2021
Withdrawn: Precision Neoantigen Discovery Using Large-scale Immunopeptidomes and Composite Modeling of MHC Peptide PresentationRachel Marty Pyke, Dattatreya Mellacheruvu, Steven Dea, et al.
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