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Journal of Chemical Information and Modeling|July 1, 2014
Docking server for the identification of heparin binding sites on proteinsScott E Mottarella, Dmitri Beglov, Natalia Beglova, et al.Proceedings of the ... IEEE Conference on Decision & Control. IEEE Conference on Decision & Control|March 22, 2013
A Message Passing Approach to Side Chain Positioning with Applications in Protein Docking RefinementMohammad Moghadasi, Dima Kozakov, Artem B Mamonov, et al.Elife|April 10, 2014
Encounter complexes and dimensionality reduction in protein-protein associationDima Kozakov, Keyong Li, David R Hall, et al.Journal of Virology|April 22, 2011
Blocking eIF4E-eIF4G interaction as a strategy to impair coronavirus replicationRegina Cencic, Marc Desforges, David R Hall, et al.Journal of Software Engineering and Applications|December 26, 2022
API Development Increases Access to Shared Computing Resources at Boston UniversityGeorge Jones, Amanda E Wakefield, Jeff Triplett, et al.Proceedings of the National Academy of Sciences of the United States of America|March 4, 2026
Bias in the AlphaFold3 prediction of ligand-induced domain motion in enzymesHao Yu, Ayse A Bekar-Cesaretli, Maria Lazou, et al.Journal of Chemical Information and Modeling|August 22, 2025
Impact of Protein Conformational Diversity on Structure-Based Prediction of DruggabilityAyse A Bekar-Cesaretli, Shray Vats, Adrian Whitty, et al.Journal of Chemical Information and Modeling|January 22, 2024
Conservation of Hot Spots and Ligand Binding Sites in Protein Models by AlphaFold2Ayse A Bekar-Cesaretli, Omeir Khan, Thu Nguyen, et al.Biochemistry|October 28, 2009
The structural basis of pregnane X receptor binding promiscuityChi-Ho Ngan, Dmitri Beglov, Aleksandra N Rudnitskaya, et al.Journal of Chemical Information and Modeling|March 8, 2024
Expanding FTMap for Fragment-Based Identification of Pharmacophore Regions in Ligand Binding SitesOmeir Khan, George Jones, Maria Lazou, et al.Pageof 33