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Molecular Systems Biology|February 8, 2017
Transcription factor family-specific DNA shape readout revealed by quantitative specificity modelsLin Yang, Yaron Orenstein, Arttu Jolma, et al.Nucleic Acids Research|December 5, 2015
Integrated microfluidic approach for quantitative high-throughput measurements of transcription factor binding affinitiesYair Glick, Yaron Orenstein, Dana Chen, et al.Genome Research|August 9, 2023
Efficient minimizer orders for large values of k using minimum decycling setsDavid Pellow, Lianrong Pu, Bariş Ekim, et al.The FEBS Journal|September 5, 2025
Modifying inhibitor specificity for homologous enzymes by machine learningDor S Gozlan, Reut Meiri, Gili Shapira, et al.Transcription|July 31, 2015
ElemeNT: a computational tool for detecting core promoter elementsAnna Sloutskin, Yehuda M Danino, Yaron Orenstein, et al.Nature Communications|March 17, 2024
A universal system for boosting gene expression in eukaryotic cell-linesInbal Vaknin, Or Willinger, Jonathan Mandl, et al.Proceedings of the National Academy of Sciences of the United States of America|March 29, 2018
Comprehensive, high-resolution binding energy landscapes reveal context dependencies of transcription factor bindingDaniel D Le, Tyler C Shimko, Arjun K Aditham, et al.Nucleic Acids Research|November 9, 2022
rG4detector, a novel RNA G-quadruplex predictor, uncovers their impact on stress granule formationMaor Turner, Yehuda M Danino, Mira Barshai, et al.ACS Chemical Biology|March 29, 2020
Custom DNA Microarrays Reveal Diverse Binding Preferences of Proteins and Small Molecules to Thousands of G-QuadruplexesSreejana Ray, Desiree Tillo, Robert E Boer, et al.Scientific Reports|September 16, 2016
SELMAP - SELEX affinity landscape MAPping of transcription factor binding sites using integrated microfluidicsDana Chen, Yaron Orenstein, Rada Golodnitsky, et al.Pageof 6