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Genome Research|June 24, 2024
Delineating yeast cleavage and polyadenylation signals using deep learningEmily Kunce Stroup, Zhe JiNature Communications|November 15, 2023
Deep learning of human polyadenylation sites at nucleotide resolution reveals molecular determinants of site usage and relevance in diseaseEmily Kunce Stroup, Zhe JiBiorxiv : the Preprint Server for Biology|October 24, 2023
Delineating yeast cleavage and polyadenylation signals using deep learningEmily Kunce Stroup, Zhe JiWiley Interdisciplinary Reviews. RNA|June 5, 2025
The Advances in Deep Learning Modeling of Polyadenylation CodesEmily Kunce Stroup, Tianjiao Sun, Qianru Li, et al.Proceedings. IEEE International Conference on Bioinformatics and Biomedicine|April 12, 2021
Phenotyping Multiple Organ Dysfunction Syndrome Using Temporal Trends in Critically Ill ChildrenEmily Kunce Stroup, Yuan Luo, L Nelson Sanchez-PintoCancer Communications (London, England)|March 30, 2019
Towards precision medicine: advances in 5-hydroxymethylcytosine cancer biomarker discovery in liquid biopsyChang Zeng, Emily Kunce Stroup, Zhou Zhang, et al.Current Protocols in Molecular Biology|September 1, 2018
Rfoot: Transcriptome-Scale Identification of RNA-Protein Complexes from Ribosome Profiling DataZhe JiCurrent Protocols in Molecular Biology|September 5, 2018
RibORF: Identifying Genome-Wide Translated Open Reading Frames Using Ribosome ProfilingZhe JiPlos One|December 29, 2009
Reprogramming of 3' untranslated regions of mRNAs by alternative polyadenylation in generation of pluripotent stem cells from different cell typesZhe Ji, Bin TianEntropy (Basel, Switzerland)|December 3, 2020
New Construction of Maximum Distance Separable (MDS) Self-Dual Codes over Finite FieldsAixian Zhang, Zhe JiPageof 27