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Briefings in Bioinformatics|December 5, 2013
Comparison of software packages for detecting differential expression in RNA-seq studiesFatemeh Seyednasrollah, Asta Laiho, Laura L EloNucleic Acids Research|August 13, 2015
ROTS: reproducible RNA-seq biomarker detector-prognostic markers for clear cell renal cell cancerFatemeh Seyednasrollah, Krista Rantanen, Panu Jaakkola, et al.Briefings in Bioinformatics|July 5, 2016
Comparison of methods to detect differentially expressed genes between single-cell populationsMaria K Jaakkola, Fatemeh Seyednasrollah, Arfa Mehmood, et al.Frontiers in Plant Science|July 25, 2022
Simultaneous Ozone and High Light Treatments Reveal an Important Role for the Chloroplast in Co-ordination of Defense SignalingEnjun Xu, Mikko Tikkanen, Fatemeh Seyednasrollah, et al.Plos Computational Biology|May 26, 2017
ROTS: An R package for reproducibility-optimized statistical testingTomi Suomi, Fatemeh Seyednasrollah, Maria K Jaakkola, et al.Epigenomics|June 5, 2020
Reproducibility-optimized detection of differential DNA methylationVeronika Suni, Fatemeh Seyednasrollah, Bishwa Ghimire, et al.F1000Research|June 29, 2019
A predictive model of overall survival in patients with metastatic castration-resistant prostate cancerMehrad Mahmoudian, Fatemeh Seyednasrollah, Liisa Koivu, et al.Scientific Reports|November 3, 2016
Longitudinal modeling of ultrasensitive and traditional prostate-specific antigen and prediction of biochemical recurrence after radical prostatectomyTeemu D Laajala, Heikki Seikkula, Fatemeh Seyednasrollah, et al.The Journal of Biological Chemistry|January 9, 2019
Hypoxia-inducible factor (HIF)-prolyl hydroxylase 3 (PHD3) maintains high HIF2A mRNA levels in clear cell renal cell carcinomaPetra Miikkulainen, Heidi Högel, Fatemeh Seyednasrollah, et al.Journal of Experimental Botany|April 17, 2024
Growth conditions trigger genotype-specific metabolic responses that affect the nutritional quality of kale cultivarsHirofumi Ishihara, Sara Alegre, Jesús Pascual, et al.Pageof 2