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Nature|March 30, 2017
DHX9 suppresses RNA processing defects originating from the Alu invasion of the human genomeTuğçe Aktaş, İbrahim Avşar Ilık, Daniel Maticzka, et al.
Bioinformatics (Oxford, England)|November 23, 2020
Casboundary: automated definition of integral Cas cassettesVictor A Padilha, Omer S Alkhnbashi, Van Dinh Tran, et al.
Molecular Cell|June 1, 2022
Anti-CRISPR prediction using deep learning reveals an inhibitor of Cas13b nucleasesKatharina G Wandera, Omer S Alkhnbashi, Harris V I Bassett, et al.
The EMBO Journal|April 2, 2026
A leader-repeat hairpin blocks extraneous CRISPR RNA production in diverse CRISPR-Cas13 systemsAngela Migur, Maximilian Feussner, Chunyu Liao, et al.
Nucleic Acids Research|June 15, 2018
Galaxy HiCExplorer: a web server for reproducible Hi-C data analysis, quality control and visualizationJoachim Wolff, Vivek Bhardwaj, Stephan Nothjunge, et al.
The Journal of Biological Chemistry|July 30, 2020
Adaptation induced by self-targeting in a type I-B CRISPR-Cas systemAris-Edda Stachler, Julia Wörtz, Omer S Alkhnbashi, et al.
Plos Computational Biology|May 26, 2017
Jupyter and Galaxy: Easing entry barriers into complex data analyses for biomedical researchersBjörn A Grüning, Eric Rasche, Boris Rebolledo-Jaramillo, et al.
Nucleic Acids Research|May 11, 2019
The RNA workbench 2.0: next generation RNA data analysisJörg Fallmann, Pavankumar Videm, Andrea Bagnacani, et al.
Cell Systems|June 29, 2018
Practical Computational Reproducibility in the Life SciencesBjörn Grüning, John Chilton, Johannes Köster, et al.
BMC Genomics|March 2, 2017
Differentiation of ncRNAs from small mRNAs in Escherichia coli O157:H7 EDL933 (EHEC) by combined RNAseq and RIBOseq - ryhB encodes the regulatory RNA RyhB and a peptide, RyhPKlaus Neuhaus, Richard Landstorfer, Svenja Simon, et al.
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