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Cell Genomics|September 25, 2025
Galaxy single-cell & spatial omics community update: Navigating new frontiers in 2025Marisa Loach, Amirhossein Naghsh Nilchi, Diana Chiang, et al.
Bioinformatics (Oxford, England)|October 24, 2009
Seed-based INTARNA prediction combined with GFP-reporter system identifies mRNA targets of the small RNA Yfr1Andreas S Richter, Christian Schleberger, Rolf Backofen, et al.
Briefings in Bioinformatics|June 27, 2025
Evaluating discrepancies in dimensionality reduction for time-series single-cell RNA-sequencing dataMaren Hackenberg, Laia Canal Guitart, Rolf Backofen, et al.
Genome Biology|January 24, 2014
GraphProt: modeling binding preferences of RNA-binding proteinsDaniel Maticzka, Sita J Lange, Fabrizio Costa, et al.
Bioinformatics (Oxford, England)|January 29, 2020
Heterogeneous networks integration for disease-gene prioritization with node kernelsVan Dinh Tran, Alessandro Sperduti, Rolf Backofen, et al.
Biochemical Society Transactions|January 30, 2013
Regulatory RNAs in archaea: first target identification in MethanoarchaeaDaniela Prasse, Claudia Ehlers, Rolf Backofen, et al.
RNA Biology|February 9, 2013
Comparative analysis ofCas6b processing and CRISPR RNA stabilityHagen Richter, Sita J Lange, Rolf Backofen, et al.
Bioinformatics (Oxford, England)|May 30, 2009
A partition function algorithm for interacting nucleic acid strandsHamidreza Chitsaz, Raheleh Salari, S Cenk Sahinalp, et al.
Nucleic Acids Research|May 26, 2011
The PETfold and PETcofold web servers for intra- and intermolecular structures of multiple RNA sequencesStefan E Seemann, Peter Menzel, Rolf Backofen, et al.
BMC Bioinformatics|May 31, 2011
Structator: fast index-based search for RNA sequence-structure patternsFernando Meyer, Stefan Kurtz, Rolf Backofen, et al.
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