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Frontiers in Genetics|July 11, 2025
HyenaCircle: a HyenaDNA-based pretrained large language model for long eccDNA predictionFuyu Li, Wenxiang Lu, Yunfei Bai
Genes|July 29, 2025
A Study on the Diagnostic and Prognostic Value of Extrachromosomal Circular DNA in Breast CancerFuyu Li, Wenxiang Lu, Lingsong Yao, et al.
Oncogene|August 29, 2024
Bioinformatics advances in eccDNA identification and analysisFuyu Li, Wenlong Ming, Wenxiang Lu, et al.
The Analyst|November 21, 2023
A comprehensive analysis of library preparation methods shows high heterogeneity of extrachromosomal circular DNA but distinct chromosomal amount levels reflecting different cell statesWenxiang Lu, Fuyu Li, Yunfei Ouyang, et al.
Briefings in Bioinformatics|November 6, 2023
FLED: a full-length eccDNA detector for long-reads sequencing dataFuyu Li, Wenlong Ming, Wenxiang Lu, et al.
Analytical Chemistry|August 26, 2022
Novel Method of Full-Length RNA-seq That Expands the Identification of Non-Polyadenylated RNAs Using Nanopore SequencingXiaohan Li, Kequan Yu, Fuyu Li, et al.
Gene|January 10, 2023
Integrated analysis of mRNA and extrachromosomal circular DNA profiles to identify the potential mRNA biomarkers in breast cancerYunfei Ouyang, Wenxiang Lu, Ying Wang, et al.
The Analyst|September 6, 2024
Full-length circRNA sequencing method using low-input RNAs and profiling of circRNAs in MPTP-PD mice on a nanopore platformYing Wang, Xiaohan Li, Wenxiang Lu, et al.
Molecular and Cellular Probes|July 24, 2019
A novel approach to improving hybrid capture sequencing targeting efficiencyWenXiang Lu, Miao Zhu, Yi Chen, et al.
Peerj|October 9, 2020
The mechanism and detection of alternative splicing events in circular RNAsXiaohan Li, Bing Zhang, Fuyu Li, et al.
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