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Proteins|July 1, 1996
Exploring the energy landscapes of molecular recognition by a genetic algorithm: analysis of the requirements for robust docking of HIV-1 protease and FKBP-12 complexesG M Verkhivker, P A Rejto, D K Gehlhaar, et al.Chemistry & Biology|May 1, 1995
Molecular recognition of the inhibitor AG-1343 by HIV-1 protease: conformationally flexible docking by evolutionary programmingD K Gehlhaar, G M Verkhivker, P A Rejto, et al.Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing|June 25, 1999
Thermodynamics and kinetics of ligand-protein binding studied with the weighted histogram analysis method and simulated annealingD Bouzida, S Arthurs, A B Colson, et al.Journal of Computer-Aided Molecular Design|December 29, 2000
Deciphering common failures in molecular docking of ligand-protein complexesG M Verkhivker, D Bouzida, D K Gehlhaar, et al.Journal of Molecular Recognition : JMR|December 28, 1999
Towards understanding the mechanisms of molecular recognition by computer simulations of ligand-protein interactionsG M Verkhivker, P A Rejto, D Bouzida, et al.Proteins|December 18, 2001
Hierarchy of simulation models in predicting molecular recognition mechanisms from the binding energy landscapes: structural analysis of the peptide complexes with SH2 domainsG M Verkhivker, D Bouzida, D K Gehlhaar, et al.Pageof 2