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Journal of Computational Chemistry|March 27, 2002
Rapid grid-based construction of the molecular surface and the use of induced surface charge to calculate reaction field energies: applications to the molecular systems and geometric objectsWalter Rocchia, Sundaram Sridharan, Anthony Nicholls, et al.Bioinformatics (Oxford, England)|January 13, 2012
Predicting folding free energy changes upon single point mutationsZhe Zhang, Lin Wang, Yang Gao, et al.Plos Computational Biology|March 8, 2013
Enhancing human spermine synthase activity by engineered mutationsZhe Zhang, Yueli Zheng, Margo Petukh, et al.Communications in Computational Physics|April 1, 2014
DelPhi Web Server: A comprehensive online suite for electrostatic calculations of biological macromolecules and their complexesSubhra Sarkar, Shawn Witham, Jie Zhang, et al.International Journal of Molecular Sciences|June 3, 2014
Computational and experimental approaches to reveal the effects of single nucleotide polymorphisms with respect to disease diagnosticsTugba G Kucukkal, Ye Yang, Susan C Chapman, et al.Computational and Mathematical Methods in Medicine|August 16, 2014
ProBLM web server: protein and membrane placement and orientation packageTaylor Kimmett, Nicholas Smith, Shawn Witham, et al.Biophysical Journal|June 28, 2012
Predicting nonspecific ion binding using DelPhiMarharyta Petukh, Maxim Zhenirovskyy, Chuan Li, et al.International Journal of Computational Biology and Drug Design|February 8, 2011
Structural assessment of the effects of amino acid substitutions on protein stability and protein protein interactionShaolei Teng, Anand K Srivastava, Charles E Schwartz, et al.Frontiers in Molecular Biosciences|September 26, 2019
DFMD: Fast and Effective DelPhiForce Steered Molecular Dynamics Approach to Model Ligand Approach Toward a Receptor: Application to Spermine Synthase EnzymeYunhui Peng, Ye Yang, Lin Li, et al.Frontiers in Molecular Biosciences|April 12, 2018
Gaussian-Based Smooth Dielectric Function: A Surface-Free Approach for Modeling Macromolecular Binding in SolventsArghya Chakravorty, Zhe Jia, Yunhui Peng, et al.Pageof 138