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Journal of Chemical Information and Modeling|December 22, 2020
BCL::Conf: Improved Open-Source Knowledge-Based Conformation Sampling Using the Crystallography Open DatabaseJeffrey Mendenhall, Benjamin P Brown, Sandeepkumar Kothiwale, et al.Plos One|June 16, 2026
Prediction of pre- and postfusion conformations of class I fusion proteins with AlphaFold2Sevilay Gülesen, Victoria Most, Clara T Schoeder, et al.Biochimica Et Biophysica Acta|July 23, 2014
Guanylate Cyclase-Activating Protein-2 Undergoes Structural Changes upon Binding to Detergent Micelles and BicellesAleksandra Margetić, David Nannemann, Jens Meiler, et al.Journal of Computer-Aided Molecular Design|December 6, 2013
Simultaneous prediction of binding free energy and specificity for PDZ domain-peptide interactionsJoseph J Crivelli, Gordon Lemmon, Kristian W Kaufmann, et al.Journal of Chemical Information and Modeling|February 10, 2025
Long-Range Electrostatics in Serine Proteases: Machine Learning-Driven Reaction Sampling Yields Insights for Enzyme DesignAlexander Zlobin, Valentina Maslova, Julia Beliaeva, et al.Frontiers in Cell and Developmental Biology|March 18, 2024
Sequence and structural insights of monoleucine-based sorting motifs contained within the cytoplasmic domains of basolateral proteinsSarah J Harmych, Claiborne W Tydings, Jens Meiler, et al.Journal of Structural Biology|October 30, 2010
RosettaEPR: an integrated tool for protein structure determination from sparse EPR dataStephanie J Hirst, Nathan Alexander, Hassane S McHaourab, et al.Plos One|July 12, 2013
Assessment and challenges of ligand docking into comparative models of G-protein coupled receptorsElizabeth Dong Nguyen, Christoffer Norn, Thomas M Frimurer, et al.Gene|July 8, 2008
BCL::Align-sequence alignment and fold recognition with a custom scoring function onlineElizabeth Dong, Jarrod Smith, Sten Heinze, et al.Elife|March 3, 2022
Sampling alternative conformational states of transporters and receptors with AlphaFold2Diego Del Alamo, Davide Sala, Hassane S Mchaourab, et al.Pageof 44