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Arxiv|March 17, 2025
Measurement noise scaling laws for cellular representation learningGokul Gowri, Peng Yin, Allon M KleinArxiv|September 16, 2024
Approximating mutual information of high-dimensional variables using learned representationsGokul Gowri, Xiao-Kang Lun, Allon M Klein, et al.Nature Computational Science|June 7, 2024
Scalable design of orthogonal DNA barcode librariesGokul Gowri, Kuanwei Sheng, Peng YinArxiv|February 27, 2026
Generative Distribution Embeddings: Lifting autoencoders to the space of distributions for multiscale representation learningNic Fishman, Gokul Gowri, Peng Yin, et al.Proceedings of the National Academy of Sciences of the United States of America|July 8, 2020
Lineage reconstruction from clonal correlationsCaleb Weinreb, Allon M KleinNature Reviews. Genetics|April 3, 2020
Lineage tracing meets single-cell omics: opportunities and challengesDaniel E Wagner, Allon M KleinBMC Genomics|December 1, 2025
A mannitol-based buffer improves single-cell RNA sequencing of high-salt marine cellsTal D Scully, Allon M KleinMolecular Cell|October 25, 2011
The critical discussion group: fostering personal and scientific growthAllon M Klein, Laura Lande-DinerDevelopment (Cambridge, England)|July 14, 2011
Universal patterns of stem cell fate in cycling adult tissuesAllon M Klein, Benjamin D SimonsBioinformatics (Oxford, England)|December 12, 2017
SPRING: a kinetic interface for visualizing high dimensional single-cell expression dataCaleb Weinreb, Samuel Wolock, Allon M KleinPageof 101