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Cell Reports|October 28, 2020
Brain-Enriched Coding and Long Non-coding RNA Genes Are Overrepresented in Recurrent Neurodevelopmental Disorder CNVsHamid Alinejad-Rokny, Julian I T Heng, Alistair R R ForrestScientific Reports|January 30, 2020
CANCERSIGN: a user-friendly and robust tool for identification and classification of mutational signatures and patterns in cancer genomesMasroor Bayati, Hamid R Rabiee, Mehrdad Mehrbod, et al.Journal of Biomedical Informatics|October 24, 2015
A method to avoid errors associated with the analysis of hypermutated viral sequences by alignment-based methodsHamid Alinejad-Rokny, Diako EbrahimiPlos Computational Biology|September 9, 2022
Correction: MaxHiC: A robust background correction model to identify biologically relevant chromatin interactions in Hi-C and capture Hi-C experimentsHamid Alinejad-Rokny, Rassa Ghavami Modegh, Hamid R Rabiee, et al.Plos Computational Biology|June 24, 2022
MaxHiC: A robust background correction model to identify biologically relevant chromatin interactions in Hi-C and capture Hi-C experimentsHamid Alinejad-Rokny, Rassa Ghavami Modegh, Hamid R Rabiee, et al.Plos Computational Biology|July 24, 2023
DeepGenePrior: A deep learning model for prioritizing genes affected by copy number variantsZahra Rahaie, Hamid R Rabiee, Hamid Alinejad-RoknyBMC Bioinformatics|August 29, 2024
CNVDeep: deep association of copy number variants with neurocognitive disordersZahra Rahaie, Hamid R Rabiee, Hamid Alinejad-RoknyPlos One|February 6, 2014
Insights into the motif preference of APOBEC3 enzymesDiako Ebrahimi, Hamid Alinejad-Rokny, Miles P DavenportBioinformatics (Oxford, England)|May 24, 2021
NeuroCirc: an integrative resource of circular RNA expression in the human brainKieran Walsh, Akira Gokool, Hamid Alinejad-Rokny, et al.International Journal of Molecular Sciences|February 11, 2023
A Comprehensive Investigation of Genomic Variants in Prostate Cancer Reveals 30 Putative Regulatory VariantsMahdieh Labani, Amin Beheshti, Ahmadreza Argha, et al.Pageof 21