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Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|December 15, 2023
DeepPPThermo: A Deep Learning Framework for Predicting Protein Thermostability Combining Protein-Level and Amino Acid-Level FeaturesXiaoyang Xiang, Jiaxuan Gao, Yanrui DingProteins|March 18, 2026
HAGGNN: Hydration-Aware Geometric Graph Neural Network for Protein Thermal Stability PredictionYingying Jiang, Lingzhi Liu, Yanrui DingJournal of Theoretical Biology|October 23, 2022
RSC-based differential model with correlation removal for improving multi-omics clusteringZhengshu Lu, Xu Chen, Jing Yang, et al.Rivista Di Biologia|June 10, 2010
Exploring unfolding pathway of CGTase: insight from molecular dynamics simulationYi Fu, Yanrui Ding, Zhiguo Chen, et al.Sheng Wu Yi Xue Gong Cheng Xue Za Zhi = Journal of Biomedical Engineering = Shengwu Yixue Gongchengxue Zazhi|August 31, 2025
[Research on prediction model of protein thermostability integrating graph embedding and network topology features]Shuyi Pan, Xiaoyang Xiang, Qunfang Yan, et al.Journal of Cellular Biochemistry|August 28, 2019
Identification of the complex regulatory relationships related to gastric cancer from lncRNA-miRNA-mRNA networkJie Wang, Yanrui Ding, Yanyan Wu, et al.Protein and Peptide Letters|January 14, 2014
Comparison of protein-water interactions in psychrophilic, mesophilic, and thermophilic Fe-SODZhaolin Mou, Yanrui Ding, Xueqin Wang, et al.IEEE Journal of Biomedical and Health Informatics|January 16, 2024
Prediction of Drug-Target Interactions With High- Quality Negative Samples and a Network-Based Deep Learning FrameworkZhixing Cheng, Deling Xu, Dewu Ding, et al.Journal of Ethnopharmacology|March 27, 2024
CDCS-TCM: A framework based on complex network theory to analyze the causality and dynamic correlation of substances in the metabolic process of traditional Chinese medicineJiaxuan Gao, Xiaoyang Xiang, Qunfang Yan, et al.Methods (San Diego, Calif.)|March 6, 2022
A 70‑RNA model based on SVR and RFE for predicting the pancreatic cancer clinical prognosisXu Chen, Jing Yang, Zhengshu Lu, et al.Pageof 1,386