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Frontiers in Molecular Biosciences|June 9, 2022
Deep Learning in RNA Structure StudiesHaopeng Yu, Yiman Qi, Yiliang DingNucleic Acids Research|October 16, 2022
G4Atlas: a comprehensive transcriptome-wide G-quadruplex databaseHaopeng Yu, Yiman Qi, Bibo Yang, et al.Nature Machine Intelligence|December 20, 2024
An interpretable RNA foundation model for exploring functional RNA motifs in plantsHaopeng Yu, Heng Yang, Wenqing Sun, et al.Nucleic Acids Research|February 16, 2024
Prediction of DNA i-motifs via machine learningBibo Yang, Dilek Guneri, Haopeng Yu, et al.Nucleic Acids Research|April 27, 2024
iM-Seeker: a webserver for DNA i-motifs prediction and scoring via automated machine learningHaopeng Yu, Fan Li, Bibo Yang, et al.Nature Communications|November 20, 2024
Unveiling RNA structure-mediated regulations of RNA stability in wheatHaidan Wu, Haopeng Yu, Yueying Zhang, et al.Biochemical Society Transactions|August 26, 2021
Novel insights into the pervasive role of RNA structure in post-transcriptional regulation of gene expression in plantsHuakun Zhang, Yiliang DingAnnual Review of Plant Biology|March 18, 2025
RNA Structure: Function and Application in Plant BiologyHuakun Zhang, Yiliang DingPageof 12