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Methods (San Diego, Calif.)|April 6, 2019
How to benchmark RNA secondary structure prediction accuracyDavid H MathewsMethods in Molecular Biology (Clifton, N.J.)|April 14, 2010
Using OligoWalk to identify efficient siRNA sequencesDavid H MathewsCurrent Protocols in Bioinformatics|June 19, 2014
Using the RNAstructure Software Package to Predict Conserved RNA StructuresDavid H MathewsCurrent Protocols in Bioinformatics|June 19, 2014
RNA Secondary Structure Analysis Using RNAstructureDavid H MathewsThe Journal of Chemical Physics|June 10, 2008
On mesh-based Ewald methods: optimal parameters for two differentiation schemesHarry A Stern, Keith G CalkinsRNA (New York, N.Y.)|May 18, 2007
Predicting helical coaxial stacking in RNA multibranch loopsRahul Tyagi, David H MathewsRNA (New York, N.Y.)|April 7, 2019
Estimating uncertainty in predicted folding free energy changes of RNA secondary structuresJeffrey Zuber, David H MathewsMethods in Molecular Biology (Clifton, N.J.)|September 23, 2024
Sequence Design Using RNAstructureMingyi Zhu, David H MathewsBiophysical Journal|March 4, 2010
Accounting for ligand conformational restriction in calculations of protein-ligand binding affinitiesCen Gao, Min-Sun Park, Harry A SternBioinformatics (Oxford, England)|January 4, 2011
Multilign: an algorithm to predict secondary structures conserved in multiple RNA sequencesZhenjiang Xu, David H MathewsPageof 20