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Developmental Cell|June 21, 2022
Brief encounters: The relationship between enhancer proximity and gene expressionHelen Ray-Jones, Mikhail SpivakovCellular and Molecular Life Sciences : CMLS|August 20, 2021
Transcriptional enhancers and their communication with gene promotersHelen Ray-Jones, Mikhail SpivakovFrontiers in Genetics|November 11, 2021
Prioritisation of Candidate Genes Underpinning COVID-19 Host Genetic Traits Based on High-Resolution 3D Chromosomal TopologyMichiel J Thiecke, Emma J Yang, Oliver S Burren, et al.Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology|June 4, 2014
Spurious transcription factor binding: non-functional or genetically redundant?Mikhail SpivakovNature Reviews. Genetics|March 17, 2007
Epigenetic signatures of stem-cell identityMikhail Spivakov, Amanda G FisherNature Protocols|August 10, 2021
Detecting chromosomal interactions in Capture Hi-C data with CHiCAGO and companion toolsPaula Freire-Pritchett, Helen Ray-Jones, Monica Della Rosa, et al.Plos One|May 10, 2014
A comparison of peak callers used for DNase-Seq dataHashem Koohy, Thomas A Down, Mikhail Spivakov, et al.Nucleic Acids Research|March 1, 2020
Functional effects of variation in transcription factor binding highlight long-range gene regulation by epromotersJoanna Mitchelmore, Nastasiya F Grinberg, Chris Wallace, et al.Bioinformatics (Oxford, England)|June 15, 2019
Chicdiff: a computational pipeline for detecting differential chromosomal interactions in Capture Hi-C dataJonathan Cairns, William R Orchard, Valeriya Malysheva, et al.Neuroscience|July 25, 2017
Nogo presence is inversely associated with shifts in cortical microglial morphology following experimental diffuse brain injuryJenna M Ziebell, Helen Ray-Jones, Jonathan LifshitzPageof 6