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Biorxiv : the Preprint Server for Biology|August 26, 2024
Enhancing transcriptome expression quantification through accurate assignment of long RNA sequencing reads with TranSignerHyun Joo Ji, Mihaela Pertea
Genome Biology|August 28, 2025
Enhancing transcriptome expression quantification through accurate assignment of long RNA sequencing reads with TranSignerHyun Joo Ji, Mihaela Pertea
Nature Reviews. Genetics|February 17, 2026
Annotating genomes at increased scale and resolutionHyun Joo Ji, Mihaela Pertea, Steven L Salzberg
Nature Communications|November 8, 2023
EASTR: Identifying and eliminating systematic alignment errors in multi-exon genesIda Shinder, Richard Hu, Hyun Joo Ji, et al.
Biorxiv : the Preprint Server for Biology|July 14, 2025
Isoswitching drives the aging process in human brainsBeril Erdogdu, Hyun Joo Ji, Zoe C Rudnick, et al.
Genes|August 24, 2012
The human transcriptome: an unfinished storyMihaela Pertea
F1000Research|September 21, 2020
GFF Utilities: GffRead and GffCompareGeo Pertea, Mihaela Pertea
Genome Biology|October 12, 2010
Do-it-yourself genetic testingSteven L Salzberg, Mihaela Pertea
Plant Molecular Biology|February 28, 2002
Computational gene finding in plantsMihaela Pertea, Steven L Salzberg
Genome Biology|May 6, 2010
Between a chicken and a grape: estimating the number of human genesMihaela Pertea, Steven L Salzberg
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