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BMC Structural Biology|February 26, 2014
The 6th Computational Structural Bioinformatics WorkshopJing He, Amarda Shehu, Nurit Haspel, et al.Journal of Bioinformatics and Computational Biology|June 30, 2011
A two-stage evolutionary approach for effective classification of hypersensitive DNA sequencesUday Kamath, Amarda Shehu, Kenneth A De JongMolecules (Basel, Switzerland)|February 15, 2019
Computational Structural Biology: Successes, Future Directions, and ChallengesRuth Nussinov, Chung-Jung Tsai, Amarda Shehu, et al.Biomolecules|July 27, 2022
Fewer Dimensions, More Structures for Improved Discrete Models of Dynamics of Free versus Antigen-Bound AntibodyKazi Lutful Kabir, Buyong Ma, Ruth Nussinov, et al.BMC Bioinformatics|August 2, 2014
Exploring representations of protein structure for automated remote homology detection and mapping of protein structure spaceKevin Molloy, M Jennifer Van, Daniel Barbara, et al.Journal of Bioinformatics and Computational Biology|July 20, 2012
Guiding probabilistic search of the protein conformational space with structural profilesBrian Olson, Kevin Molloy, S Farid Hendi, et al.Bioinformatics (Oxford, England)|May 5, 2022
Small molecule generation via disentangled representation learningYuanqi Du, Xiaojie Guo, Yinkai Wang, et al.Plos Computational Biology|April 29, 2016
Principles and Overview of Sampling Methods for Modeling Macromolecular Structure and DynamicsTatiana Maximova, Ryan Moffatt, Buyong Ma, et al.Bioinformatics Advances|January 26, 2023
Generating tertiary protein structures via interpretable graph variational autoencodersXiaojie Guo, Yuanqi Du, Sivani Tadepalli, et al.Molecules (Basel, Switzerland)|May 14, 2020
Reducing Ensembles of Protein Tertiary Structures Generated De Novo via ClusteringAhmed Bin Zaman, Parastoo Kamranfar, Carlotta Domeniconi, et al.Pageof 8