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Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|September 30, 2010
Reconstructing ancestral genomic sequences by co-evolution: formal definitions, computational issues, and biological examplesTamir Tuller, Hadas Birin, Martin Kupiec, et al.
IEEE/ACM Transactions on Computational Biology and Bioinformatics|August 1, 2009
Parsimony score of phylogenetic networks: hardness results and a linear-time heuristicGuohua Jin, Luay Nakhleh, Sagi Snir, et al.
NPJ Genomic Medicine|August 13, 2021
Estimating the predictive power of silent mutations on cancer classification and prognosisTal Gutman, Guy Goren, Omri Efroni, et al.
IEEE Transactions on Biomedical Circuits and Systems|April 1, 2014
The RNA polymerase flow model of gene transcriptionShlomit Edri, Eran Gazit, Eyal Cohen, et al.
RNA Biology|March 11, 2021
Identification of conserved slow codons that are important for protein expression and functionMichal Perach, Zohar Zafrir, Tamir Tuller, et al.
Bioinformatics (Oxford, England)|August 25, 2006
Maximum likelihood of phylogenetic networksGuohua Jin, Luay Nakhleh, Sagi Snir, et al.
Genome Biology and Evolution|August 2, 2011
Selection for translation efficiency on synonymous polymorphisms in recent human evolutionYedael Y Waldman, Tamir Tuller, Alon Keinan, et al.
Proceedings of the National Academy of Sciences of the United States of America|February 6, 2010
Translation efficiency is determined by both codon bias and folding energyTamir Tuller, Yedael Y Waldman, Martin Kupiec, et al.
Proceedings of the National Academy of Sciences of the United States of America|December 31, 2024
Predicting gene sequences with AI to study codon usage patternsTomer Sidi, Shir Bahiri-Elitzur, Tamir Tuller, et al.
BMC Bioinformatics|February 4, 2010
Comparative classification of species and the study of pathway evolution based on the alignment of metabolic pathwaysAdi Mano, Tamir Tuller, Oded Béjà, et al.
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