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Bioinformatics (Oxford, England)|February 7, 2004
Metrics for comparing regulatory sequences on the basis of pattern countsJacques van HeldenBMC Bioinformatics|January 25, 2008
Evaluation of phylogenetic footprint discovery for predicting bacterial cis-regulatory elements and revealing their evolutionRekin's Janky, Jacques van HeldenBMC Bioinformatics|November 8, 2006
Evaluation of clustering algorithms for protein-protein interaction networksSylvain Brohée, Jacques van HeldenMethods in Molecular Biology (Clifton, N.J.)|November 13, 2007
Discovery of motifs in promoters of coregulated genesOlivier Sand, Jacques van HeldenBioinformatics (Oxford, England)|August 20, 2009
info-gibbs: a motif discovery algorithm that directly optimizes information content during samplingMatthieu Defrance, Jacques van HeldenMethods in Molecular Biology (Clifton, N.J.)|December 7, 2011
Predicting metabolic pathways by sub-network extractionKaroline Faust, Jacques van HeldenMethods in Molecular Biology (Clifton, N.J.)|November 13, 2007
Discovery of conserved motifs in promoters of orthologous genes in prokaryotesRekin's Janky, Jacques van HeldenMolecular Biosystems|December 22, 2009
The powerful law of the power law and other myths in network biologyGipsi Lima-Mendez, Jacques van HeldenBio Systems|June 8, 2011
Prediction of metabolic pathways from genome-scale metabolic networksKaroline Faust, Didier Croes, Jacques van HeldenPageof 8