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Jeffrey A Ruffolo

Showing results (1-10 of 18) with videos related to

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Nature Methods|September 30, 2025
What does a language model know about proteins?Jeffrey A Ruffolo
Nature Biotechnology|February 16, 2024
Designing proteins with language modelsJeffrey A Ruffolo, Ali Madani
Journal of Neurophysiology|July 23, 2020
Modeling of lamprey reticulospinal neurons: multiple distinct parameter sets yield realistic simulationsJeffrey A Ruffolo, Andrew D McClellan
Patterns (New York, N.Y.)|February 24, 2022
Antibody structure prediction using interpretable deep learningJeffrey A Ruffolo, Jeremias Sulam, Jeffrey J Gray
Biorxiv : the Preprint Server for Biology|July 28, 2023
Contextual protein and antibody encodings from equivariant graph transformersSai Pooja Mahajan, Jeffrey A Ruffolo, Jeffrey J Gray
Cell Systems|November 1, 2023
IgLM: Infilling language modeling for antibody sequence designRichard W Shuai, Jeffrey A Ruffolo, Jeffrey J Gray
Protein Science : a Publication of the Protein Society|December 26, 2023
Flexible protein-protein docking with a multitrack iterative transformerLee-Shin Chu, Jeffrey A Ruffolo, Ameya Harmalkar, et al.
Biorxiv : the Preprint Server for Biology|July 10, 2023
Flexible Protein-Protein Docking with a Multi-Track Iterative TransformerLee-Shin Chu, Jeffrey A Ruffolo, Ameya Harmalkar, et al.
Plos One|June 15, 2022
Simultaneous prediction of antibody backbone and side-chain conformations with deep learningDeniz Akpinaroglu, Jeffrey A Ruffolo, Sai Pooja Mahajan, et al.
Frontiers in Immunology|November 7, 2022
Hallucinating structure-conditioned antibody libraries for target-specific bindersSai Pooja Mahajan, Jeffrey A Ruffolo, Rahel Frick, et al.
Pageof 2

Showing results (1-10 of 18) with videos related to

Sort By:
Pageof 2
Nature Methods|September 30, 2025
What does a language model know about proteins?Jeffrey A Ruffolo
Nature Biotechnology|February 16, 2024
Designing proteins with language modelsJeffrey A Ruffolo, Ali Madani
Journal of Neurophysiology|July 23, 2020
Modeling of lamprey reticulospinal neurons: multiple distinct parameter sets yield realistic simulationsJeffrey A Ruffolo, Andrew D McClellan
Patterns (New York, N.Y.)|February 24, 2022
Antibody structure prediction using interpretable deep learningJeffrey A Ruffolo, Jeremias Sulam, Jeffrey J Gray
Biorxiv : the Preprint Server for Biology|July 28, 2023
Contextual protein and antibody encodings from equivariant graph transformersSai Pooja Mahajan, Jeffrey A Ruffolo, Jeffrey J Gray
Cell Systems|November 1, 2023
IgLM: Infilling language modeling for antibody sequence designRichard W Shuai, Jeffrey A Ruffolo, Jeffrey J Gray
Protein Science : a Publication of the Protein Society|December 26, 2023
Flexible protein-protein docking with a multitrack iterative transformerLee-Shin Chu, Jeffrey A Ruffolo, Ameya Harmalkar, et al.
Biorxiv : the Preprint Server for Biology|July 10, 2023
Flexible Protein-Protein Docking with a Multi-Track Iterative TransformerLee-Shin Chu, Jeffrey A Ruffolo, Ameya Harmalkar, et al.
Plos One|June 15, 2022
Simultaneous prediction of antibody backbone and side-chain conformations with deep learningDeniz Akpinaroglu, Jeffrey A Ruffolo, Sai Pooja Mahajan, et al.
Frontiers in Immunology|November 7, 2022
Hallucinating structure-conditioned antibody libraries for target-specific bindersSai Pooja Mahajan, Jeffrey A Ruffolo, Rahel Frick, et al.
Pageof 2