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Journal of Molecular Biology|April 17, 2026
ShapeME: A tool and web front-end for de novo discovery of structural motifs underpinning protein-DNA interactionsJeremy W Schroeder, Vivian Ramirez, Michael B Wolfe, et al.Biorxiv : the Preprint Server for Biology|March 22, 2023
Tracking live-cell single-molecule dynamics enables measurements of heterochromatinassociated protein-protein interactionsZiyuan Chen, Melissa Seman, Ali Farhat, et al.Current Opinion in Microbiology|December 4, 2017
Visualizing bacterial DNA replication and repair with molecular resolutionYilai Li, Jeremy W Schroeder, Lyle A Simmons, et al.Critical Reviews in Biochemistry and Molecular Biology|November 8, 2017
Sources of spontaneous mutagenesis in bacteriaJeremy W Schroeder, Ponlkrit Yeesin, Lyle A Simmons, et al.Journal of Bacteriology|September 28, 2016
Implementation and Data Analysis of Tn-seq, Whole-Genome Resequencing, and Single-Molecule Real-Time Sequencing for Bacterial GeneticsPeter E Burby, Taylor M Nye, Jeremy W Schroeder, et al.Microbiology and Molecular Biology Reviews : MMBR|August 31, 2012
DNA repair and genome maintenance in Bacillus subtilisJustin S Lenhart, Jeremy W Schroeder, Brian W Walsh, et al.Current Biology : CB|March 1, 2016
The Effect of Local Sequence Context on Mutational Bias of Genes Encoded on the Leading and Lagging StrandsJeremy W Schroeder, William G Hirst, Gabriella A Szewczyk, et al.Nature Protocols|April 28, 2026
Profiling large-scale protein occupancy on bacterial genomes using IPOD-HRRebecca L Hurto, Jeremy W Schroeder, Julian Trouillon, et al.Critical Reviews in Biochemistry and Molecular Biology|November 13, 2014
Ribonucleotides in bacterial DNAJeremy W Schroeder, Justin R Randall, Lindsay A Matthews, et al.Plos Genetics|August 28, 2020
The roles of replication-transcription conflict in mutagenesis and evolution of genome organizationJeremy W Schroeder, T Sabari Sankar, Jue D Wang, et al.Pageof 5