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Current Protocols in Bioinformatics|March 6, 2012
Identifying proteomic LC-MS/MS data sets with Bumbershoot and IDPickerJerry D Holman, Ze-Qiang Ma, David L TabbMethods in Molecular Biology (Clifton, N.J.)|April 30, 2013
Informatics of protein and posttranslational modification detection via shotgun proteomicsJerry D Holman, Surendra Dasari, David L TabbCurrent Protocols in Bioinformatics|June 19, 2014
Employing ProteoWizard to Convert Raw Mass Spectrometry DataJerry D Holman, David L Tabb, Parag MallickJournal of Proteome Research|July 18, 2008
DirecTag: accurate sequence tags from peptide MS/MS through statistical scoringDavid L Tabb, Ze-Qiang Ma, Daniel B Martin, et al.Analytical and Bioanalytical Chemistry|May 4, 2012
Refining comparative proteomics by spectral counting to account for shared peptides and multiple search enginesYao-Yi Chen, Surendra Dasari, Ze-Qiang Ma, et al.Molecular & Cellular Proteomics : MCP|March 11, 2011
A bioinformatics workflow for variant peptide detection in shotgun proteomicsJing Li, Zengliu Su, Ze-Qiang Ma, et al.Journal of the American Society for Mass Spectrometry|July 1, 2015
The SEQUEST family treeDavid L TabbAnalytical Chemistry|June 16, 2012
QuaMeter: multivendor performance metrics for LC-MS/MS proteomics instrumentationZe-Qiang Ma, Kenneth O Polzin, Surendra Dasari, et al.Pageof 13