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Biorxiv : the Preprint Server for Biology|November 18, 2024
VAPOR: Variational autoencoder with transport operators decouples co-occurring biological processes in developmentJie Sheng, Daifeng WangCommunications Biology|November 20, 2021
Manifold learning analysis suggests strategies to align single-cell multimodal data of neuronal electrophysiology and transcriptomicsJiawei Huang, Jie Sheng, Daifeng WangBMC Medicine|May 13, 2022
Sustained correction of hippocampal neurogenic and cognitive deficits after a brief treatment by Nutlin-3 in a mouse model of fragile X syndromeSahar Javadi, Yue Li, Jie Sheng, et al.Alzheimer'S & Dementia : the Journal of the Alzheimer'S Association|December 23, 2025
Basic Science and PathogenesisDaifeng WangHuman Molecular Genetics|January 17, 2023
Predicting brain-regional gene regulatory networks from multi-omics for Alzheimer's disease phenotypes and Covid-19 severitySaniya Khullar, Daifeng WangBiorxiv : the Preprint Server for Biology|January 16, 2026
SegJointGene: joint cell segmentation and spatial gene prioritization by information entropy guided convolutional neural networksHaotian Ma, Daifeng WangBiorxiv : the Preprint Server for Biology|June 30, 2021
Predicting gene regulatory networks from multi-omics to link genetic risk variants and neuroimmunology to Alzheimer's disease phenotypesSaniya Khullar, Daifeng WangBioinformatics (Oxford, England)|June 25, 2026
SegJointGene: joint cell segmentation and spatial gene prioritization by information entropy guided convolutional neural networksHaotian Ma, Daifeng WangPlos Computational Biology|April 3, 2020
Multiview learning for understanding functional multiomicsNam D Nguyen, Daifeng WangBioinformatics (Oxford, England)|July 15, 2025
ARTEMIS integrates autoencoders and Schrödinger Bridges to predict continuous dynamics of gene expression, cell population, and perturbation from time-series single-cell dataSayali Anil Alatkar, Daifeng WangPageof 89