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Cell|July 23, 2025
SPIDR enables multiplexed mapping of RNA-protein interactions and uncovers a mechanism for selective translational suppression upon cell stressErica Wolin, Jimmy K Guo, Mario R Blanco, et al.Bioinformatics (Oxford, England)|May 30, 2009
Identifying novel constrained elements by exploiting biased substitution patternsManuel Garber, Mitchell Guttman, Michele Clamp, et al.Cell|July 2, 2013
Ribosome profiling provides evidence that large noncoding RNAs do not encode proteinsMitchell Guttman, Pamela Russell, Nicholas T Ingolia, et al.Nature Structural & Molecular Biology|March 18, 2022
Xist spatially amplifies SHARP/SPEN recruitment to balance chromosome-wide silencing and specificity to the X chromosomeJoanna W Jachowicz, Mackenzie Strehle, Abhik K Banerjee, et al.Molecular Cell|September 29, 2020
High-Resolution Mapping of Multiway Enhancer-Promoter Interactions Regulating Pathogen DetectionPranitha Vangala, Rachel Murphy, Sofia A Quinodoz, et al.Cell Reports|November 30, 2022
Simultaneous mapping of 3D structure and nascent RNAs argues against nuclear compartments that preclude transcriptionIsabel N Goronzy, Sofia A Quinodoz, Joanna W Jachowicz, et al.Genome Research|February 6, 2010
Digital transcriptome profiling from attomole-level RNA samplesFatih Ozsolak, Alon Goren, Melissa Gymrek, et al.RNA (New York, N.Y.)|November 24, 2016
Comparison of SHAPE reagents for mapping RNA structures inside living cellsByron Lee, Ryan A Flynn, Anastasia Kadina, et al.Nature Protocols|January 11, 2022
SPRITE: a genome-wide method for mapping higher-order 3D interactions in the nucleus using combinatorial split-and-pool barcodingSofia A Quinodoz, Prashant Bhat, Peter Chovanec, et al.Nature|September 8, 2016
m(6)A RNA methylation promotes XIST-mediated transcriptional repressionDeepak P Patil, Chun-Kan Chen, Brian F Pickering, et al.Pageof 9