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Bioinformatics (Oxford, England)|June 21, 2013
Charge asymmetry in the proteins of the outer membraneJoanna S G Slusky, Roland L Dunbrack
Journal of Molecular Biology|June 27, 2018
Tight Turns of Outer Membrane Proteins: An Analysis of Sequence, Structure, and Hydrogen BondingMeghan Whitney Franklin, Joanna S G Slusky
Protein Engineering, Design & Selection : PEDS|July 23, 2021
Machine learning for enzyme engineering, selection and designRyan Feehan, Daniel Montezano, Joanna S G Slusky
The Journal of Physical Chemistry. B|April 2, 2021
Membrane Barrels Are Taller, Fatter, Inside-Out Soluble BarrelsRik Dhar, Ryan Feehan, Joanna S G Slusky
Nature Communications|June 18, 2021
Machine learning differentiates enzymatic and non-enzymatic metals in proteinsRyan Feehan, Meghan W Franklin, Joanna S G Slusky
Proceedings of the National Academy of Sciences of the United States of America|July 11, 2023
General features of transmembrane beta barrels from a large databaseDaniel Montezano, Rebecca Bernstein, Matthew M Copeland, et al.
Protein Science : a Publication of the Protein Society|March 14, 2023
MAHOMES II: A webserver for predicting if a metal binding site is enzymaticRyan Feehan, Matthew Copeland, Meghan W Franklin, et al.
Biorxiv : the Preprint Server for Biology|March 22, 2023
MAHOMES II: A webserver for predicting if a metal binding site is enzymaticRyan Feehan, Matthew Copeland, Meghan W Franklin, et al.
Methods in Enzymology|November 27, 2025
A robust protocol for refolding TolC and other outer membrane components of tripartite efflux pumps from inclusion bodiesAndrew Daufel, Andrés Cordova, S Jimmy Budiardjo, et al.
Biophysical Journal|February 11, 2023
Detergent headgroups control TolC folding in vitroAyotunde Paul Ikujuni, S Jimmy Budiardjo, Rik Dhar, et al.
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