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Journal of Computer Science and Technology|September 28, 2011
Metagenomics: Facts and Artifacts, and Computational Challenges*John C Wooley, Yuzhen YeProceedings. IEEE International Conference on Bioinformatics and Biomedicine|November 22, 2011
Identification and Quantification of Abundant Species from Pyrosequences of 16S rRNA by Consensus AlignmentYuzhen YeInternational Journal of Molecular Sciences|September 9, 2014
Identification of diversity-generating retroelements in human microbiomesYuzhen YePlos One|October 11, 2008
Probing metagenomics by rapid cluster analysis of very large datasetsWeizhong Li, John C Wooley, Adam GodzikPlos Computational Biology|March 3, 2010
A primer on metagenomicsJohn C Wooley, Adam Godzik, Iddo FriedbergBioinformatics (Oxford, England)|August 31, 2015
Utilizing de Bruijn graph of metagenome assembly for metatranscriptome analysisYuzhen Ye, Haixu TangNucleic Acids Research|May 4, 2019
MyDGR: a server for identification and characterization of diversity-generating retroelementsFatemeh Sharifi, Yuzhen YeNucleic Acids Research|December 14, 2021
Identification and classification of reverse transcriptases in bacterial genomes and metagenomesFatemeh Sharifi, Yuzhen YeMethods in Molecular Biology (Clifton, N.J.)|April 29, 2017
From Gene Annotation to Function Prediction for MetagenomicsFatemeh Sharifi, Yuzhen YeProtein Science : a Publication of the Protein Society|June 25, 2004
Database searching by flexible protein structure alignmentYuzhen Ye, Adam GodzikPageof 12