Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Filters

John D Chodera

Showing results (11-20 of 140) with videos related to

Pageof 14
Sort By:
The Journal of Chemical Physics|November 25, 2011
Replica exchange and expanded ensemble simulations as Gibbs sampling: simple improvements for enhanced mixingJohn D Chodera, Michael R Shirts
The Journal of Chemical Physics|August 7, 2009
Bayesian comparison of Markov models of molecular dynamics with detailed balance constraintSergio Bacallado, John D Chodera, Vijay Pande
Biorxiv : the Preprint Server for Biology|January 20, 2025
Fine-tuning molecular mechanics force fields to experimental free energy measurementsDominic Rufa, Joshua Fass, John D Chodera
The Journal of Chemical Physics|January 19, 2011
Estimating equilibrium ensemble averages using multiple time slices from driven nonequilibrium processes: theory and application to free energies, moments, and thermodynamic length in single-molecule pulling experimentsDavid D L Minh, John D Chodera
The Journal of Chemical Physics|October 10, 2009
Optimal estimators and asymptotic variances for nonequilibrium path-ensemble averagesDavid D L Minh, John D Chodera
Chemical Science|September 27, 2021
Fitting quantum machine learning potentials to experimental free energy data: predicting tautomer ratios in solutionMarcus Wieder, Josh Fass, John D Chodera
Advances in Experimental Medicine and Biology|December 4, 2013
Estimation and validation of Markov modelsJan-Hendrik Prinz, John D Chodera, Frank Noé
Journal of Computer-Aided Molecular Design|December 19, 2015
Modeling error in experimental assays using the bootstrap principle: understanding discrepancies between assays using different dispensing technologiesSonya M Hanson, Sean Ekins, John D Chodera
Physical Review. X|October 31, 2014
Spectral Rate Theory for Two-State KineticsJan-Hendrik Prinz, John D Chodera, Frank Noé
The Journal of Physical Chemistry. B|February 22, 2014
Time step rescaling recovers continuous-time dynamical properties for discrete-time Langevin integration of nonequilibrium systemsDavid A Sivak, John D Chodera, Gavin E Crooks
Pageof 14

Showing results (11-20 of 140) with videos related to

Sort By:
Pageof 14
The Journal of Chemical Physics|November 25, 2011
Replica exchange and expanded ensemble simulations as Gibbs sampling: simple improvements for enhanced mixingJohn D Chodera, Michael R Shirts
The Journal of Chemical Physics|August 7, 2009
Bayesian comparison of Markov models of molecular dynamics with detailed balance constraintSergio Bacallado, John D Chodera, Vijay Pande
Biorxiv : the Preprint Server for Biology|January 20, 2025
Fine-tuning molecular mechanics force fields to experimental free energy measurementsDominic Rufa, Joshua Fass, John D Chodera
The Journal of Chemical Physics|January 19, 2011
Estimating equilibrium ensemble averages using multiple time slices from driven nonequilibrium processes: theory and application to free energies, moments, and thermodynamic length in single-molecule pulling experimentsDavid D L Minh, John D Chodera
The Journal of Chemical Physics|October 10, 2009
Optimal estimators and asymptotic variances for nonequilibrium path-ensemble averagesDavid D L Minh, John D Chodera
Chemical Science|September 27, 2021
Fitting quantum machine learning potentials to experimental free energy data: predicting tautomer ratios in solutionMarcus Wieder, Josh Fass, John D Chodera
Advances in Experimental Medicine and Biology|December 4, 2013
Estimation and validation of Markov modelsJan-Hendrik Prinz, John D Chodera, Frank Noé
Journal of Computer-Aided Molecular Design|December 19, 2015
Modeling error in experimental assays using the bootstrap principle: understanding discrepancies between assays using different dispensing technologiesSonya M Hanson, Sean Ekins, John D Chodera
Physical Review. X|October 31, 2014
Spectral Rate Theory for Two-State KineticsJan-Hendrik Prinz, John D Chodera, Frank Noé
The Journal of Physical Chemistry. B|February 22, 2014
Time step rescaling recovers continuous-time dynamical properties for discrete-time Langevin integration of nonequilibrium systemsDavid A Sivak, John D Chodera, Gavin E Crooks
Pageof 14